RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
MATR3-215ENST00000510056 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
MATR3-215ENST00000510056 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
MATR3-215ENST00000510056 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
MATR3-215ENST00000510056 SRP68Q9UHB9 627 aaKnown RBP8.09□□□□□ -1.11
MATR3-215ENST00000510056 SBF1O95248 1867 aa8.09□□□□□ -1.12
MATR3-215ENST00000510056 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 PLCB3Q01970 1234 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 PPP2R5AQ15172 486 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 NFE2Q16621 373 aaPredicted RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 PHTF2Q8N3S3 785 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 INSRP06213 1382 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 TNRC6CQ9HCJ0 1690 aaKnown RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 OPLAHO14841 1288 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 FOXN1O15353 648 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 VEGFAP15692 232 aaPredicted RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 CRELD1Q96HD1 420 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 SLC4A9Q96Q91 983 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 SPG7Q9UQ90 795 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 FYB1O15117 783 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 ARMC3Q5W041 872 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 SUGP1Q8IWZ8 645 aaKnown RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 ATL2Q8NHH9 583 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 YTHDC1Q96MU7 727 aaKnown RBP8.08□□□□□ -1.12
MATR3-215ENST00000510056 ADAM33Q9BZ11 813 aa8.08□□□□□ -1.12
MATR3-215ENST00000510056 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
MATR3-215ENST00000510056 GJA5P36382 358 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 IL31Q6EBC2 164 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 ARMCX6Q7L4S7 300 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 APBA2Q99767 749 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 IFRD1O00458 451 aaPredicted RBP8.07□□□□□ -1.12
MATR3-215ENST00000510056 NDUFB5O43674 189 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
MATR3-215ENST00000510056 SRGNP10124 158 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 PRSS12P56730 875 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 COL19A1Q14993 1142 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 EML3Q32P44 896 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 KIAA0907Q7Z7F0 614 aaPredicted RBP8.07□□□□□ -1.12
MATR3-215ENST00000510056 DDX42Q86XP3 938 aaKnown RBP eCLIP8.07□□□□□ -1.12
MATR3-215ENST00000510056 PFDN2Q9UHV9 154 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 BOLA1Q9Y3E2 137 aa8.07□□□□□ -1.12
MATR3-215ENST00000510056 FGAP02671 866 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 DDR1Q08345 913 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 TBCELQ5QJ74 424 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 TRIM56Q9BRZ2 755 aaKnown RBP8.06□□□□□ -1.12
MATR3-215ENST00000510056 TMEM134Q9H6X4 195 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 GLTPD2A6NH11 291 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 ANP32CO43423 234 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 PIP5K1CO60331 668 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 KRT18P05783 430 aaKnown RBP8.06□□□□□ -1.12
MATR3-215ENST00000510056 NEK3P51956 506 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 HS2ST1Q7LGA3 356 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 CEP89Q96ST8 783 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 ZHX3Q9H4I2 956 aa8.06□□□□□ -1.12
MATR3-215ENST00000510056 PTCD1O75127 700 aaKnown RBP8.05□□□□□ -1.12
MATR3-215ENST00000510056 RPS6KA4O75676 772 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 FAM193AP78312 1265 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 MCL1Q07820 350 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 FAM169BQ8N8A8 192 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 LZTS1Q9Y250 596 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 DIS3Q9Y2L1 958 aaKnown RBP8.05□□□□□ -1.12
MATR3-215ENST00000510056 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
MATR3-215ENST00000510056 CCDC88AQ3V6T2 1871 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 PHKG2P15735 406 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 GNA15P30679 374 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 KBTBD4Q9NVX7 518 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 SWAP70Q9UH65 585 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 FLT4P35916 1363 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 KLF4O43474 513 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 POTEIP0CG38 1075 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 ZKSCAN2Q63HK3 967 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 SIX5Q8N196 739 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 EPAS1Q99814 870 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 SENP7Q9BQF6 1050 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 NOD1Q9Y239 953 aa8.05□□□□□ -1.12
MATR3-215ENST00000510056 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
MATR3-215ENST00000510056 POTECB2RU33 542 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 SLC26A4O43511 780 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 PRKAR2AP13861 404 aaKnown RBP8.04□□□□□ -1.12
MATR3-215ENST00000510056 LMNB1P20700 586 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 RAB33AQ14088 237 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 ERAP2Q6P179 960 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 IFNL2Q8IZJ0 200 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 HDAC9Q9UKV0 1011 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 ST20-MTHFSA0A0A6YYL1 179 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 WEE1P30291 646 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 GCGRP47871 477 aa8.04□□□□□ -1.12
MATR3-215ENST00000510056 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
MATR3-215ENST00000510056 CBX2Q14781 532 aaPredicted RBP8.04□□□□□ -1.12
MATR3-215ENST00000510056 PUS10Q3MIT2 529 aaKnown RBP8.04□□□□□ -1.12
MATR3-215ENST00000510056 TYW1BQ6NUM6 668 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms