RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 FOXP2O15409 715 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 EGFRP00533 1210 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 FGAP02671 866 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 EPHX2P34913 555 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 PICALMQ13492 652 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 FKBP1CQ5VVH2 108 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 TRPM4Q8TD43 1214 aa16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-204ENST00000509789 CACNB3P54284 484 aa16.51■□□□□ 0.23
CYSTM1-204ENST00000509789 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
CYSTM1-204ENST00000509789 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
CYSTM1-204ENST00000509789 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
CYSTM1-204ENST00000509789 MCM9Q9NXL9 1143 aa16.51■□□□□ 0.23
CYSTM1-204ENST00000509789 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 FLT1P17948 1338 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 ENTPD3O75355 529 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 VEGFAP15692 232 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 TNNI2P48788 182 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 HIRAP54198 1017 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 NFIAQ12857 509 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 MKRN1Q9UHC7 482 aaKnown RBP16.5■□□□□ 0.23
CYSTM1-204ENST00000509789 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 POTECB2RU33 542 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 USP17L12C9JPN9 530 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 USP17L21D6R901 530 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 HAX1O00165 279 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 ZNF213O14771 459 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 POLR3DP05423 398 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 TCP10Q12799 353 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 TNFAIP1Q13829 316 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 FAM198AQ9UFP1 575 aa16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
CYSTM1-204ENST00000509789 UTRNP46939 3433 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 HSPA4P34932 840 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 EAPPQ56P03 285 aaPredicted RBP16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 CREB3L3Q68CJ9 461 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 FAM83AQ86UY5 434 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 FAM151AQ8WW52 585 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
CYSTM1-204ENST00000509789 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 SLC27A2O14975 620 aa16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 ZSCAN29Q8IWY8 852 aaPredicted RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 DCPSQ96C86 337 aaKnown RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 GGA3Q9NZ52 723 aa16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
CYSTM1-204ENST00000509789 HLA-DOAP06340 250 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 HAND2P61296 217 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 PPARAQ07869 468 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 C12orf60Q5U649 245 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 SCN4AP35499 1836 aa16.46■□□□□ 0.23
CYSTM1-204ENST00000509789 PITPNM2Q9BZ72 1349 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 CYP2D7A0A087X1C5 515 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 CYP21A2P08686 494 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 CYP2D6P10635 497 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 RASA3Q14644 834 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 SLC4A8Q2Y0W8 1093 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 KCNB2Q92953 911 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 ANAPC4Q9UJX5 808 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
CYSTM1-204ENST00000509789 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 ANAPC15P60006 121 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 CTDSPL2Q05D32 466 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 KRT32Q14532 448 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 TBC1D32Q96NH3 1257 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 TMEM39BQ9GZU3 492 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 DEFB129Q9H1M3 183 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 NMRK2Q9NPI5 230 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 PGAP2Q9UHJ9 254 aa16.44■□□□□ 0.22
CYSTM1-204ENST00000509789 PPP2R3BQ9Y5P8 575 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms