RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 SALL3Q9BXA9 1300 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
HTT-207ENST00000509751 FAM155AB1AL88 458 aaPredicted RBP18.32■□□□□ 0.52
HTT-207ENST00000509751 ERC2O15083 957 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 PPP4CP60510 307 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 LDLRAD1Q5T700 205 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 CCDC102AQ96A19 550 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 CSRNP1Q96S65 589 aa18.32■□□□□ 0.52
HTT-207ENST00000509751 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 IGSF3O75054 1194 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 NUCB1Q02818 461 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 HOOK2Q96ED9 719 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 SLC10A4Q96EP9 437 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 WRNIP1Q96S55 665 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.52
HTT-207ENST00000509751 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
HTT-207ENST00000509751 ELP3Q9H9T3 547 aa18.31■□□□□ 0.52
HTT-207ENST00000509751 MAGEB6P1A0A0J9YX57 407 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 GLRX3O76003 335 aaKnown RBP18.3■□□□□ 0.52
HTT-207ENST00000509751 HSPA1AP0DMV8 641 aaKnown RBP18.3■□□□□ 0.52
HTT-207ENST00000509751 HSPA1BP0DMV9 641 aaKnown RBP18.3■□□□□ 0.52
HTT-207ENST00000509751 ADD2P35612 726 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 PDE1AP54750 535 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 NOGQ13253 232 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 SLC4A8Q2Y0W8 1093 aa18.3■□□□□ 0.52
HTT-207ENST00000509751 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
HTT-207ENST00000509751 FLT1P17948 1338 aa18.29■□□□□ 0.52
HTT-207ENST00000509751 USP5P45974 858 aa18.29■□□□□ 0.52
HTT-207ENST00000509751 KIF23Q02241 960 aaPredicted RBP18.29■□□□□ 0.52
HTT-207ENST00000509751 ANKRD13AQ8IZ07 590 aa18.29■□□□□ 0.52
HTT-207ENST00000509751 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
HTT-207ENST00000509751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.29■□□□□ 0.52
HTT-207ENST00000509751 ZNF341Q9BYN7 854 aa18.29■□□□□ 0.52
HTT-207ENST00000509751 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 CENPBP07199 599 aaPredicted RBP18.28■□□□□ 0.52
HTT-207ENST00000509751 INPP5BP32019 993 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 MAP2K2P36507 400 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 MAP3K9P80192 1104 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 VGLL4Q14135 290 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.28■□□□□ 0.52
HTT-207ENST00000509751 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 ZKSCAN4Q969J2 545 aaPredicted RBP18.28■□□□□ 0.52
HTT-207ENST00000509751 RIOK1Q9BRS2 568 aaKnown RBP18.28■□□□□ 0.52
HTT-207ENST00000509751 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 CSADQ9Y600 493 aa18.28■□□□□ 0.52
HTT-207ENST00000509751 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
HTT-207ENST00000509751 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
HTT-207ENST00000509751 MBD4O95243 580 aa18.27■□□□□ 0.52
HTT-207ENST00000509751 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
HTT-207ENST00000509751 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
HTT-207ENST00000509751 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
HTT-207ENST00000509751 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.51
HTT-207ENST00000509751 MAP2K1Q02750 393 aaPredicted RBP18.26■□□□□ 0.51
HTT-207ENST00000509751 SPRYD7Q5W111 196 aa18.26■□□□□ 0.51
HTT-207ENST00000509751 CERS3Q8IU89 383 aa18.26■□□□□ 0.51
HTT-207ENST00000509751 WNK4Q96J92 1243 aa18.26■□□□□ 0.51
HTT-207ENST00000509751 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
HTT-207ENST00000509751 NEFLP07196 543 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 GJA5P36382 358 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 UBE3CQ15386 1083 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 PLEKHM2Q8IWE5 1019 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 SDR42E1Q8WUS8 393 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 OPTNQ96CV9 577 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 CRNKL1Q9BZJ0 848 aaKnown RBP18.25■□□□□ 0.51
HTT-207ENST00000509751 PUS7LQ9H0K6 701 aaKnown RBP18.25■□□□□ 0.51
HTT-207ENST00000509751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.25■□□□□ 0.51
HTT-207ENST00000509751 WBP1LQ9NX94 342 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 SNCAIPQ9Y6H5 919 aa18.25■□□□□ 0.51
HTT-207ENST00000509751 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
HTT-207ENST00000509751 PRKAB2O43741 272 aa18.24■□□□□ 0.51
HTT-207ENST00000509751 OTUD5Q96G74 571 aa18.24■□□□□ 0.51
HTT-207ENST00000509751 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
HTT-207ENST00000509751 TSKSQ9UJT2 592 aa18.24■□□□□ 0.51
HTT-207ENST00000509751 COL2A1P02458 1487 aaPredicted RBP18.24■□□□□ 0.51
HTT-207ENST00000509751 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
HTT-207ENST00000509751 MYH7P12883 1935 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 UNCXA6NJT0 531 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 FOXN1O15353 648 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 PDE4AP27815 886 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 ZNF112Q9UJU3 913 aa18.23■□□□□ 0.51
HTT-207ENST00000509751 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
HTT-207ENST00000509751 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
HTT-207ENST00000509751 CRACR2BQ8N4Y2 399 aaPredicted RBP18.22■□□□□ 0.51
HTT-207ENST00000509751 APPBP2Q92624 585 aa18.22■□□□□ 0.51
HTT-207ENST00000509751 TRIM34Q9BYJ4 488 aa18.22■□□□□ 0.51
HTT-207ENST00000509751 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
HTT-207ENST00000509751 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
HTT-207ENST00000509751 FOCADQ5VW36 1801 aa18.21■□□□□ 0.51
HTT-207ENST00000509751 PHF20L1A8MW92 1017 aa18.21■□□□□ 0.51
HTT-207ENST00000509751 M0R2C6 588 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms