RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 ADCY3O60266 1144 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 PTPRAP18433 802 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 PHKA1P46020 1223 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 FLT3LGP49771 235 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 RGS3P49796 1198 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 UBXN2AP68543 259 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 SCYL3Q8IZE3 742 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 HTATIP2Q9BUP3 242 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
CYSTM1-203ENST00000509589 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 SOX1O00570 391 aaPredicted RBP12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 INHAP05111 366 aa12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 ADORA1P30542 326 aa12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 SALL1Q9NSC2 1324 aa12.83□□□□□ -0.36
CYSTM1-203ENST00000509589 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 TRIM75PA6NK02 468 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 SGPL1O95470 568 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 FASTKD5Q7L8L6 764 aaKnown RBP12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 TAOK2Q9UL54 1235 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 GAKO14976 1311 aa12.82□□□□□ -0.36
CYSTM1-203ENST00000509589 ENTPD3O75355 529 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 CIAO1O76071 339 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 PICALMQ13492 652 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 DEFB118Q96PH6 123 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 CEP126Q9P2H0 1117 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 NR2E3Q9Y5X4 410 aa12.81□□□□□ -0.36
CYSTM1-203ENST00000509589 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 TNPO2O14787 897 aaKnown RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 EVI5O60447 810 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 UBTFL1P0CB47 393 aaPredicted RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 TREML2Q5T2D2 321 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 ANKRD13CQ8N6S4 541 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 SLC45A1Q9Y2W3 748 aa12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
CYSTM1-203ENST00000509589 SEMA3EO15041 775 aa12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 BTDP43251 543 aa12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 IRF5Q13568 498 aa12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
CYSTM1-203ENST00000509589 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 PAWRQ96IZ0 340 aaKnown RBP12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 A0A0C4DFX4 3053 aa12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 LOC285556D6RIA3 1793 aa12.78□□□□□ -0.36
CYSTM1-203ENST00000509589 SIPA1L1O43166 1804 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 E9PSI1 815 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 RHBDL3P58872 404 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 TIMM10P62072 90 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 TRIM32Q13049 653 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
CYSTM1-203ENST00000509589 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 MECOMQ03112 1051 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 FAM110CQ1W6H9 321 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 COA7Q96BR5 231 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 MEIS3Q99687 375 aa12.76□□□□□ -0.37
CYSTM1-203ENST00000509589 GPR75-ASB3A0A0A6YYF3 556 aa12.75□□□□□ -0.37
CYSTM1-203ENST00000509589 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms