RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 ERVV-1B6SEH8 477 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 POLR3DP05423 398 aaPredicted RBP10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 CHRNA2Q15822 529 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 OTUD7BQ6GQQ9 843 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 FBXO38Q6PIJ6 1188 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 REXO1L1PQ8IX06 675 aa10.64□□□□□ -0.71
PDGFRA-208ENST00000509490 ARHGAP6O43182 974 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 PDE8BO95263 885 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 PTPREP23469 700 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 CTSWP56202 376 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 ENOX1Q8TC92 643 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 HOOK1Q9UJC3 728 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 UBN2Q6ZU65 1347 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 MROH5Q6ZUA9 1318 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 PATL2C9JE40 543 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 ZBTB43O43298 467 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 RANBP6O60518 1105 aaKnown RBP10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 SMC2O95347 1197 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 CDC27P30260 824 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 CCDC102BQ68D86 513 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 MLKLQ8NB16 471 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 UBXN6Q9BZV1 441 aa10.63□□□□□ -0.71
PDGFRA-208ENST00000509490 ZSCAN12O43309 604 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 PDE6AP16499 860 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 GNAT2P19087 354 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 HAND2P61296 217 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 KRI1Q8N9T8 703 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 STAG1Q8WVM7 1258 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 PIH1D3Q9NQM4 214 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 A0A1B0GUL6 1792 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 STX10O60499 249 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 MMP1P03956 469 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 FECHP22830 423 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 ERCC5P28715 1186 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 MORC3Q14149 939 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 BMS1Q14692 1282 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 TERF2Q15554 542 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 RILPL1Q5EBL4 403 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 NOSTRINQ8IVI9 506 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 KRT23Q9C075 422 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 KCNH3Q9ULD8 1083 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 A0A087WWV3 80 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 IARSP41252 1262 aaKnown RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 FOSBP53539 338 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 UBASH3AP57075 661 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 LPIN2Q92539 896 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 PRDM10Q9NQV6 1147 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 ZNF446Q9NWS9 450 aa10.62□□□□□ -0.71
PDGFRA-208ENST00000509490 BCL9O00512 1426 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 EFCAB8A8MWE9 144 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 SEMA3EO15041 775 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 TADA3O75528 432 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 STARD3NLO95772 234 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ELF2Q15723 593 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 METTL24Q5JXM2 366 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 STK11IPQ8N1F8 1099 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 MSL3Q8N5Y2 521 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ANAPC4Q9UJX5 808 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 SLIT2O94813 1529 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 PDE8AO60658 829 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ITGA6P23229 1130 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ERCC4Q92889 916 aaPredicted RBP10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 TRMT1Q9NXH9 659 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 SRPRBQ9Y5M8 271 aaKnown RBP10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ZNF532Q9HCE3 1301 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 ZNF831Q5JPB2 1677 aa10.61□□□□□ -0.71
PDGFRA-208ENST00000509490 BMP6P22004 513 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 TRIM29Q14134 588 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 LONRF3Q496Y0 759 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 NAP1L2Q9ULW6 460 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 GOLGA8AA7E2F4 631 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 ATP1A3P13637 1013 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 TOB1P50616 345 aaPredicted RBP10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 SSRP1Q08945 709 aaKnown RBP10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 SYT10Q6XYQ8 523 aa10.6□□□□□ -0.71
PDGFRA-208ENST00000509490 LDHAL6AQ6ZMR3 332 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms