RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 EIF1AXP47813 144 aaKnown RBP5.29□□□□□ -1.56
XRCC4-204ENST00000509268 SPRED3Q2MJR0 410 aa5.29□□□□□ -1.56
XRCC4-204ENST00000509268 LIN7BQ9HAP6 207 aa5.29□□□□□ -1.56
XRCC4-204ENST00000509268 SEPT3Q9UH03 358 aa5.29□□□□□ -1.56
XRCC4-204ENST00000509268 GTF2IRD1Q9UHL9 959 aa5.29□□□□□ -1.56
XRCC4-204ENST00000509268 FOXD3Q9UJU5 478 aaPredicted RBP5.29□□□□□ -1.56
XRCC4-204ENST00000509268 POLIQ9UNA4 740 aa5.29□□□□□ -1.56
XRCC4-204ENST00000509268 TCAF2A6NFQ2 919 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 ITIH2P19823 946 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 GRIA4P48058 902 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 ATG14Q6ZNE5 492 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 C20orf173Q96LM9 149 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 TCF12Q99081 682 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 DISC1Q9NRI5 854 aa5.28□□□□□ -1.56
XRCC4-204ENST00000509268 A0A1W2PP55 124 aa5.27□□□□□ -1.57
XRCC4-204ENST00000509268 RNGTTO60942 597 aaKnown RBP5.27□□□□□ -1.57
XRCC4-204ENST00000509268 GDNFP39905 211 aa5.27□□□□□ -1.57
XRCC4-204ENST00000509268 NSUN3Q9H649 340 aaKnown RBP5.27□□□□□ -1.57
XRCC4-204ENST00000509268 LIG1P18858 919 aa5.26□□□□□ -1.57
XRCC4-204ENST00000509268 GLDCP23378 1020 aa5.26□□□□□ -1.57
XRCC4-204ENST00000509268 FAM214BQ7L5A3 538 aa5.26□□□□□ -1.57
XRCC4-204ENST00000509268 GALNT12Q8IXK2 581 aa5.26□□□□□ -1.57
XRCC4-204ENST00000509268 CCDC120Q96HB5 630 aa5.26□□□□□ -1.57
XRCC4-204ENST00000509268 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
XRCC4-204ENST00000509268 ATG7O95352 703 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 CLCN7P51798 805 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
XRCC4-204ENST00000509268 KIF4BQ2VIQ3 1234 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 TMEM164Q5U3C3 297 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 SPACA3Q8IXA5 215 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 TOP6BLQ8N6T0 577 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 DIRC2Q96SL1 478 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 ZNF576Q9H609 170 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 PARD6AQ9NPB6 346 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 KRT82Q9NSB4 513 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 SMG5Q9UPR3 1016 aaKnown RBP5.25□□□□□ -1.57
XRCC4-204ENST00000509268 ITPKAP23677 461 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 TTLL4Q14679 1199 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 TPRNQ4KMQ1 711 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 EPB41L4BQ9H329 900 aa5.25□□□□□ -1.57
XRCC4-204ENST00000509268 CCDC86Q9H6F5 360 aaKnown RBP5.25□□□□□ -1.57
XRCC4-204ENST00000509268 DCP1AQ9NPI6 582 aaPredicted RBP5.25□□□□□ -1.57
XRCC4-204ENST00000509268 NUAK1O60285 661 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 FOXD2O60548 495 aaPredicted RBP5.24□□□□□ -1.57
XRCC4-204ENST00000509268 SRFP11831 508 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 ATP2B4P23634 1241 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 MPSTP25325 297 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 RPS26P11Q5JNZ5 115 aaPredicted RBP5.24□□□□□ -1.57
XRCC4-204ENST00000509268 KIAA0319Q5VV43 1072 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 WDR89Q96FK6 387 aaPredicted RBP5.24□□□□□ -1.57
XRCC4-204ENST00000509268 SLC26A8Q96RN1 970 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 PCDHGC5Q9Y5F6 944 aa5.24□□□□□ -1.57
XRCC4-204ENST00000509268 PITPNM2Q9BZ72 1349 aa5.23□□□□□ -1.57
XRCC4-204ENST00000509268 ZNF862O60290 1169 aa5.23□□□□□ -1.57
XRCC4-204ENST00000509268 NPR3P17342 541 aa5.23□□□□□ -1.57
XRCC4-204ENST00000509268 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.23□□□□□ -1.57
XRCC4-204ENST00000509268 SSU72Q9NP77 194 aaKnown RBP5.23□□□□□ -1.57
XRCC4-204ENST00000509268 ETV2O00321 342 aaPredicted RBP5.22□□□□□ -1.57
XRCC4-204ENST00000509268 POLR3DP05423 398 aaPredicted RBP5.22□□□□□ -1.57
XRCC4-204ENST00000509268 HCLS1P14317 486 aaPredicted RBP5.22□□□□□ -1.57
XRCC4-204ENST00000509268 LINC00310P59036 64 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 SRPK2P78362 688 aaKnown RBP5.22□□□□□ -1.57
XRCC4-204ENST00000509268 AAMPQ13685 434 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 NKPD1Q17RQ9 610 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 NPAS4Q8IUM7 802 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 KCNN1Q92952 543 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 C19orf73Q9NVV2 129 aa5.22□□□□□ -1.57
XRCC4-204ENST00000509268 GNAT3A8MTJ3 354 aa5.21□□□□□ -1.57
XRCC4-204ENST00000509268 SYN1P17600 705 aa5.21□□□□□ -1.57
XRCC4-204ENST00000509268 ISL2Q96A47 359 aa5.21□□□□□ -1.57
XRCC4-204ENST00000509268 CARS2Q9HA77 564 aaKnown RBP5.21□□□□□ -1.57
XRCC4-204ENST00000509268 FAM13AO94988 1023 aa5.21□□□□□ -1.58
XRCC4-204ENST00000509268 RNF214Q8ND24 703 aa5.21□□□□□ -1.58
XRCC4-204ENST00000509268 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
XRCC4-204ENST00000509268 NEFMP07197 916 aa5.2□□□□□ -1.58
XRCC4-204ENST00000509268 GJD3Q8N144 294 aa5.2□□□□□ -1.58
XRCC4-204ENST00000509268 PRDM10Q9NQV6 1147 aa5.2□□□□□ -1.58
XRCC4-204ENST00000509268 SLAIN2Q9P270 581 aa5.2□□□□□ -1.58
XRCC4-204ENST00000509268 NEFLP07196 543 aa5.19□□□□□ -1.58
XRCC4-204ENST00000509268 GSTP1P09211 210 aaKnown RBP5.19□□□□□ -1.58
XRCC4-204ENST00000509268 RAC2P15153 192 aa5.19□□□□□ -1.58
XRCC4-204ENST00000509268 ERVK-24P63145 666 aa5.19□□□□□ -1.58
XRCC4-204ENST00000509268 GTF3C2Q8WUA4 911 aaPredicted RBP5.19□□□□□ -1.58
XRCC4-204ENST00000509268 BORCS6Q96GS4 357 aa5.19□□□□□ -1.58
XRCC4-204ENST00000509268 IRF2BPLQ9H1B7 796 aa5.19□□□□□ -1.58
XRCC4-204ENST00000509268 ZNF777Q9ULD5 760 aaPredicted RBP5.19□□□□□ -1.58
XRCC4-204ENST00000509268 NFIXQ14938 502 aa5.18□□□□□ -1.58
XRCC4-204ENST00000509268 ABHD4Q8TB40 342 aa5.18□□□□□ -1.58
XRCC4-204ENST00000509268 FOXQ1Q9C009 403 aa5.18□□□□□ -1.58
XRCC4-204ENST00000509268 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
XRCC4-204ENST00000509268 EHD4Q9H223 541 aa5.18□□□□□ -1.58
XRCC4-204ENST00000509268 A0A0G2JLL6 359 aaPredicted RBP5.17□□□□□ -1.58
XRCC4-204ENST00000509268 FZD6O60353 706 aa5.17□□□□□ -1.58
XRCC4-204ENST00000509268 BMP7P18075 431 aa5.17□□□□□ -1.58
XRCC4-204ENST00000509268 ZC3H12AQ5D1E8 599 aaKnown RBP5.17□□□□□ -1.58
XRCC4-204ENST00000509268 CXorf38Q8TB03 319 aa5.17□□□□□ -1.58
XRCC4-204ENST00000509268 SEMA3GQ9NS98 782 aa5.17□□□□□ -1.58
XRCC4-204ENST00000509268 MAPK8IP1Q9UQF2 711 aa5.17□□□□□ -1.58
XRCC4-204ENST00000509268 KCNK12Q9HB15 430 aa5.16□□□□□ -1.58
XRCC4-204ENST00000509268 PRPF40BQ6NWY9 871 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms