RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SCYL3Q8IZE3 742 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 SSH1Q8WYL5 1049 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 PICK1Q9NRD5 415 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
CXCL1-202ENST00000509101 ZHX2Q9Y6X8 837 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 SALL1Q9NSC2 1324 aa19.96■□□□□ 0.79
CXCL1-202ENST00000509101 ADCY3O60266 1144 aa19.95■□□□□ 0.78
CXCL1-202ENST00000509101 LOC285556D6RIA3 1793 aa19.95■□□□□ 0.78
CXCL1-202ENST00000509101 PHF20L1A8MW92 1017 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 ELNP15502 786 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 PTPRAP18433 802 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 PHKA1P46020 1223 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 FASTKD5Q7L8L6 764 aaKnown RBP19.94■□□□□ 0.78
CXCL1-202ENST00000509101 PRO3102Q9H379 93 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 DENND2AQ9ULE3 1009 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 NR2E3Q9Y5X4 410 aa19.94■□□□□ 0.78
CXCL1-202ENST00000509101 ZBTB7BO15156 539 aaPredicted RBP19.93■□□□□ 0.78
CXCL1-202ENST00000509101 INHAP05111 366 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 SLURP2P0DP57 97 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 FLT3LGP49771 235 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 SH3BP5LQ7L8J4 393 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
CXCL1-202ENST00000509101 CEP126Q9P2H0 1117 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.93■□□□□ 0.78
CXCL1-202ENST00000509101 AFG3L2Q9Y4W6 797 aa19.93■□□□□ 0.78
CXCL1-202ENST00000509101 TNPO2O14787 897 aaKnown RBP19.92■□□□□ 0.78
CXCL1-202ENST00000509101 ENTPD3O75355 529 aa19.92■□□□□ 0.78
CXCL1-202ENST00000509101 CIAO1O76071 339 aa19.92■□□□□ 0.78
CXCL1-202ENST00000509101 SGPL1O95470 568 aa19.92■□□□□ 0.78
CXCL1-202ENST00000509101 SMCR8Q8TEV9 937 aaPredicted RBP19.92■□□□□ 0.78
CXCL1-202ENST00000509101 IDI2Q9BXS1 227 aa19.92■□□□□ 0.78
CXCL1-202ENST00000509101 LRRFIP2Q9Y608 721 aaKnown RBP19.92■□□□□ 0.78
CXCL1-202ENST00000509101 GAKO14976 1311 aa19.92■□□□□ 0.78
CXCL1-202ENST00000509101 TRIM75PA6NK02 468 aa19.91■□□□□ 0.78
CXCL1-202ENST00000509101 SEMA3EO15041 775 aa19.91■□□□□ 0.78
CXCL1-202ENST00000509101 UBTFL1P0CB47 393 aaPredicted RBP19.91■□□□□ 0.78
CXCL1-202ENST00000509101 PICALMQ13492 652 aa19.91■□□□□ 0.78
CXCL1-202ENST00000509101 CCDC84Q86UT8 332 aaPredicted RBP19.91■□□□□ 0.78
CXCL1-202ENST00000509101 DZIP1Q86YF9 867 aaKnown RBP19.91■□□□□ 0.78
CXCL1-202ENST00000509101 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
CXCL1-202ENST00000509101 TAOK2Q9UL54 1235 aa19.91■□□□□ 0.78
CXCL1-202ENST00000509101 LAMA3Q16787 3333 aa19.9■□□□□ 0.78
CXCL1-202ENST00000509101 DDTLA6NHG4 134 aaPredicted RBP19.9■□□□□ 0.78
CXCL1-202ENST00000509101 ADORA1P30542 326 aa19.9■□□□□ 0.78
CXCL1-202ENST00000509101 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
CXCL1-202ENST00000509101 DEFB118Q96PH6 123 aa19.9■□□□□ 0.78
CXCL1-202ENST00000509101 DDX4Q9NQI0 724 aaKnown RBP19.9■□□□□ 0.78
CXCL1-202ENST00000509101 PA2G4Q9UQ80 394 aaKnown RBP19.9■□□□□ 0.78
CXCL1-202ENST00000509101 SLC45A1Q9Y2W3 748 aa19.9■□□□□ 0.78
CXCL1-202ENST00000509101 EVI5O60447 810 aa19.89■□□□□ 0.77
CXCL1-202ENST00000509101 CCDC102BQ68D86 513 aa19.89■□□□□ 0.77
CXCL1-202ENST00000509101 PXYLP1Q8TE99 480 aa19.89■□□□□ 0.77
CXCL1-202ENST00000509101 ABCF2Q9UG63 623 aa19.89■□□□□ 0.77
CXCL1-202ENST00000509101 E9PSI1 815 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
CXCL1-202ENST00000509101 TFRCP02786 760 aaKnown RBP19.88■□□□□ 0.77
CXCL1-202ENST00000509101 IL15P40933 162 aaPredicted RBP19.88■□□□□ 0.77
CXCL1-202ENST00000509101 BTDP43251 543 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 IRF5Q13568 498 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 RASGRF1Q13972 1273 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 ANKRD13CQ8N6S4 541 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 AGTPBP1Q9UPW5 1226 aa19.88■□□□□ 0.77
CXCL1-202ENST00000509101 DDX60LQ5H9U9 1706 aaKnown RBP19.88■□□□□ 0.77
CXCL1-202ENST00000509101 MROH7-TTC4A0A0A0MT08 1334 aa19.87■□□□□ 0.77
CXCL1-202ENST00000509101 MAP3K10Q02779 954 aa19.87■□□□□ 0.77
CXCL1-202ENST00000509101 PAK6Q9NQU5 681 aaPredicted RBP19.87■□□□□ 0.77
CXCL1-202ENST00000509101 PLXNB2O15031 1838 aa19.87■□□□□ 0.77
CXCL1-202ENST00000509101 TREML2Q5T2D2 321 aa19.86■□□□□ 0.77
CXCL1-202ENST00000509101 SLF2Q8IX21 1173 aa19.86■□□□□ 0.77
CXCL1-202ENST00000509101 COA7Q96BR5 231 aa19.86■□□□□ 0.77
CXCL1-202ENST00000509101 COL6A3P12111 3177 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 PDS5AQ29RF7 1337 aaKnown RBP19.85■□□□□ 0.77
CXCL1-202ENST00000509101 FAM196BA6NMK8 535 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 SOX1O00570 391 aaPredicted RBP19.85■□□□□ 0.77
CXCL1-202ENST00000509101 FAM110CQ1W6H9 321 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 DIS3LQ8TF46 1054 aaKnown RBP19.85■□□□□ 0.77
CXCL1-202ENST00000509101 PNMA3Q9UL41 463 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 SIPA1L1O43166 1804 aa19.85■□□□□ 0.77
CXCL1-202ENST00000509101 A0A1W2PPC1 479 aa19.84■□□□□ 0.77
CXCL1-202ENST00000509101 LRCH3Q96II8 777 aa19.84■□□□□ 0.77
CXCL1-202ENST00000509101 PAWRQ96IZ0 340 aaKnown RBP19.84■□□□□ 0.77
CXCL1-202ENST00000509101 CRISPLD2Q9H0B8 497 aa19.84■□□□□ 0.77
CXCL1-202ENST00000509101 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.84■□□□□ 0.77
CXCL1-202ENST00000509101 CDK5RAP2Q96SN8 1893 aa19.84■□□□□ 0.77
CXCL1-202ENST00000509101 MAST2Q6P0Q8 1798 aa19.83■□□□□ 0.77
CXCL1-202ENST00000509101 ZBTB22O15209 634 aa19.83■□□□□ 0.77
CXCL1-202ENST00000509101 TIMM10P62072 90 aa19.83■□□□□ 0.77
CXCL1-202ENST00000509101 SLFN5Q08AF3 891 aa19.83■□□□□ 0.77
CXCL1-202ENST00000509101 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.77
CXCL1-202ENST00000509101 PROCA1Q8NCQ7 364 aaPredicted RBP19.83■□□□□ 0.77
CXCL1-202ENST00000509101 FAM163AQ96GL9 167 aaPredicted RBP19.83■□□□□ 0.77
CXCL1-202ENST00000509101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.83■□□□□ 0.77
CXCL1-202ENST00000509101 STAP2Q9UGK3 403 aa19.83■□□□□ 0.77
CXCL1-202ENST00000509101 CAPN2P17655 700 aa19.82■□□□□ 0.76
CXCL1-202ENST00000509101 RHBDL3P58872 404 aa19.82■□□□□ 0.76
CXCL1-202ENST00000509101 MECOMQ03112 1051 aa19.82■□□□□ 0.76
CXCL1-202ENST00000509101 ERICH6Q7L0X2 663 aa19.82■□□□□ 0.76
CXCL1-202ENST00000509101 ZNF384Q8TF68 577 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms