RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 KRT23Q9C075 422 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 SLC4A4Q9Y6R1 1079 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 MAGEB6P1A0A0J9YX57 407 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 CTAGE5O15320 804 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 CAMK4Q16566 473 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 AKNAD1Q5T1N1 836 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 MYH13Q9UKX3 1938 aa13.47□□□□□ -0.25
PRPF40B-203ENST00000508736 SH2B2O14492 632 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 BBOX1O75936 387 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 KLRK1P26718 216 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 CCDC73Q6ZRK6 1079 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 TMC4Q7Z404 712 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 ADGRA1Q86SQ6 560 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 NSUN4Q96CB9 384 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 PGBD1Q96JS3 809 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 BRIP1Q9BX63 1249 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 RCOR1Q9UKL0 485 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.25
PRPF40B-203ENST00000508736 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 GOLGA8BA8MQT2 603 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 LIFRP42702 1097 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 TDO2P48775 406 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 SPTY2D1Q68D10 685 aaPredicted RBP13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 HPS5Q9UPZ3 1129 aa13.46□□□□□ -0.26
PRPF40B-203ENST00000508736 KIAA1551Q9HCM1 1747 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 DUOX1Q9NRD9 1551 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 NEDD4P46934 1319 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 CPLX1O14810 134 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 PRKAB2O43741 272 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 NR1I2O75469 434 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 PCP11498 1178 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 MFSD6Q6ZSS7 791 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 CYB5R4Q7L1T6 521 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 CKAP2LQ8IYA6 745 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 MIGA1Q8NAN2 632 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 PODXL2Q9NZ53 605 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
PRPF40B-203ENST00000508736 NRXN2Q9P2S2 1712 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 B4E1Z4 1266 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 POLD1P28340 1107 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 FOSBP53539 338 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 ZNF804AQ7Z570 1209 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 TDRD7Q8NHU6 1098 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 WDR66Q8TBY9 1149 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 ZNF384Q8TF68 577 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 NID2Q14112 1375 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 RCAN1P53805 252 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 MECOMQ03112 1051 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 PPARAQ07869 468 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 C8orf76Q96K31 380 aa13.44□□□□□ -0.26
PRPF40B-203ENST00000508736 CDKL5O76039 1030 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 TMTC2Q8N394 836 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 LY9Q9HBG7 655 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 LRRC37AA6NMS7 1700 aa13.43□□□□□ -0.26
PRPF40B-203ENST00000508736 FGRP09769 529 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 ME1P48163 572 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 NT5C2P49902 561 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 CTDSPL2Q05D32 466 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 FAM160A1Q05DH4 1040 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 APOA5Q6Q788 366 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 USP28Q96RU2 1077 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 ORC3Q9UBD5 711 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 R3HCC1Q9Y3T6 440 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 STX1AQ16623 288 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 SDR42E1Q8WUS8 393 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 TACC3Q9Y6A5 838 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 ECM29Q5VYK3 1845 aa13.42□□□□□ -0.26
PRPF40B-203ENST00000508736 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 PRDX5P30044 214 aa13.41□□□□□ -0.26
PRPF40B-203ENST00000508736 ZNF165P49910 485 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms