RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 CNTNAP1P78357 1384 aa20.89■□□□□ 0.94
TRIM60-203ENST00000508504 CYP2D7A0A087X1C5 515 aa20.89■□□□□ 0.93
TRIM60-203ENST00000508504 VEGFAP15692 232 aaPredicted RBP20.89■□□□□ 0.93
TRIM60-203ENST00000508504 DLK2Q6UY11 383 aa20.89■□□□□ 0.93
TRIM60-203ENST00000508504 KIAA1211Q6ZU35 1233 aa20.89■□□□□ 0.93
TRIM60-203ENST00000508504 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
TRIM60-203ENST00000508504 DSCC1Q9BVC3 393 aa20.89■□□□□ 0.93
TRIM60-203ENST00000508504 CYP2D6P10635 497 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 USP50Q70EL3 339 aaPredicted RBP20.88■□□□□ 0.93
TRIM60-203ENST00000508504 USP26Q9BXU7 913 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 ATP8A2Q9NTI2 1148 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 PALD1Q9ULE6 856 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 TAF6LQ9Y6J9 622 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 NAV1Q8NEY1 1877 aa20.88■□□□□ 0.93
TRIM60-203ENST00000508504 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
TRIM60-203ENST00000508504 REC8O95072 547 aa20.87■□□□□ 0.93
TRIM60-203ENST00000508504 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
TRIM60-203ENST00000508504 SH3BP5LQ7L8J4 393 aa20.87■□□□□ 0.93
TRIM60-203ENST00000508504 TMEM39BQ9GZU3 492 aa20.87■□□□□ 0.93
TRIM60-203ENST00000508504 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
TRIM60-203ENST00000508504 RBM8AQ9Y5S9 174 aaKnown RBP20.87■□□□□ 0.93
TRIM60-203ENST00000508504 USP17L12C9JPN9 530 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 USP17L21D6R901 530 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 TDO2P48775 406 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 CTR9Q6PD62 1173 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 OSBPL5Q9H0X9 879 aaPredicted RBP20.86■□□□□ 0.93
TRIM60-203ENST00000508504 TMOD2Q9NZR1 351 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 MYH1P12882 1939 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 DDTLA6NHG4 134 aaPredicted RBP20.86■□□□□ 0.93
TRIM60-203ENST00000508504 PLCD1P51178 756 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 HAND2P61296 217 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 PRAMEF18Q5VWM3 479 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 NAPBQ9H115 298 aa20.86■□□□□ 0.93
TRIM60-203ENST00000508504 RASA3Q14644 834 aa20.85■□□□□ 0.93
TRIM60-203ENST00000508504 ALX1Q15699 326 aa20.85■□□□□ 0.93
TRIM60-203ENST00000508504 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
TRIM60-203ENST00000508504 NECTIN1Q15223 517 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 FKBP1CQ5VVH2 108 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 GIMAP6Q6P9H5 292 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 PNMA8AQ86V59 439 aaPredicted RBP20.84■□□□□ 0.93
TRIM60-203ENST00000508504 STK11IPQ8N1F8 1099 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 NACAP1Q9BZK3 213 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 NBPF3Q9H094 633 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 DEFB129Q9H1M3 183 aa20.84■□□□□ 0.93
TRIM60-203ENST00000508504 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.93
TRIM60-203ENST00000508504 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
TRIM60-203ENST00000508504 TACC3Q9Y6A5 838 aa20.83■□□□□ 0.93
TRIM60-203ENST00000508504 ADM5C9JUS6 153 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 ENTPD3O75355 529 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.92
TRIM60-203ENST00000508504 CYP21A2P08686 494 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 FAM151AQ8WW52 585 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 TEPSINQ96N21 525 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 INCENPQ9NQS7 918 aa20.83■□□□□ 0.92
TRIM60-203ENST00000508504 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.92
TRIM60-203ENST00000508504 SIPA1L1O43166 1804 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 CTDSPL2Q05D32 466 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 C12orf60Q5U649 245 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 MAP1SQ66K74 1059 aaPredicted RBP20.82■□□□□ 0.92
TRIM60-203ENST00000508504 FAM83AQ86UY5 434 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 ZSCAN29Q8IWY8 852 aaPredicted RBP20.82■□□□□ 0.92
TRIM60-203ENST00000508504 RASEFQ8IZ41 740 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 GPBP1L1Q9HC44 474 aaPredicted RBP20.82■□□□□ 0.92
TRIM60-203ENST00000508504 ZMYM6O95789 1325 aa20.82■□□□□ 0.92
TRIM60-203ENST00000508504 SLC27A2O14975 620 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 POLR3DP05423 398 aaPredicted RBP20.81■□□□□ 0.92
TRIM60-203ENST00000508504 COL9A3Q14050 684 aaPredicted RBP20.81■□□□□ 0.92
TRIM60-203ENST00000508504 CREB3L3Q68CJ9 461 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 ZC3H15Q8WU90 426 aaKnown RBP20.81■□□□□ 0.92
TRIM60-203ENST00000508504 DCPSQ96C86 337 aaKnown RBP20.81■□□□□ 0.92
TRIM60-203ENST00000508504 DYNLL2Q96FJ2 89 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 CLEC11AQ9Y240 323 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 PITPNM2Q9BZ72 1349 aa20.81■□□□□ 0.92
TRIM60-203ENST00000508504 FAM196BA6NMK8 535 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 YY1P25490 414 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 HSPA4P34932 840 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 PPARAQ07869 468 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 KRT26Q7Z3Y9 468 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 APOBEC3FQ8IUX4 373 aaKnown RBP20.8■□□□□ 0.92
TRIM60-203ENST00000508504 TBC1D10CQ8IV04 446 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
TRIM60-203ENST00000508504 ATRNL1Q5VV63 1379 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 LAMB1P07942 1786 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 TNFAIP1Q13829 316 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 SBK1Q52WX2 424 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 SLC44A5Q8NCS7 719 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 CSRNP1Q96S65 589 aa20.8■□□□□ 0.92
TRIM60-203ENST00000508504 GLIS2Q9BZE0 524 aaPredicted RBP20.8■□□□□ 0.92
TRIM60-203ENST00000508504 LAMA4Q16363 1823 aa20.79■□□□□ 0.92
TRIM60-203ENST00000508504 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIM60-203ENST00000508504 NBPF12Q5TAG4 269 aaPredicted RBP20.79■□□□□ 0.92
TRIM60-203ENST00000508504 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
TRIM60-203ENST00000508504 CTNNA3Q9UI47 895 aa20.79■□□□□ 0.92
TRIM60-203ENST00000508504 ZNF213O14771 459 aa20.78■□□□□ 0.92
TRIM60-203ENST00000508504 TNNI2P48788 182 aa20.78■□□□□ 0.92
TRIM60-203ENST00000508504 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
TRIM60-203ENST00000508504 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
TRIM60-203ENST00000508504 SULF1Q8IWU6 871 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms