RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
RAB28-205ENST00000508274 ZNF112Q9UJU3 913 aa17.57■□□□□ 0.4
RAB28-205ENST00000508274 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
RAB28-205ENST00000508274 GPR75-ASB3A0A0A6YYF3 556 aa17.56■□□□□ 0.4
RAB28-205ENST00000508274 TNRC18O15417 2968 aaPredicted RBP17.56■□□□□ 0.4
RAB28-205ENST00000508274 ENTPD3O75355 529 aa17.56■□□□□ 0.4
RAB28-205ENST00000508274 TTC39AQ5SRH9 613 aa17.56■□□□□ 0.4
RAB28-205ENST00000508274 RAI14Q9P0K7 980 aa17.56■□□□□ 0.4
RAB28-205ENST00000508274 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
RAB28-205ENST00000508274 SOX10P56693 466 aa17.55■□□□□ 0.4
RAB28-205ENST00000508274 CAP1Q01518 475 aa17.55■□□□□ 0.4
RAB28-205ENST00000508274 PPIL2Q13356 520 aa17.55■□□□□ 0.4
RAB28-205ENST00000508274 PKN2Q16513 984 aaKnown RBP17.55■□□□□ 0.4
RAB28-205ENST00000508274 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
RAB28-205ENST00000508274 DBNLQ9UJU6 430 aaKnown RBP17.55■□□□□ 0.4
RAB28-205ENST00000508274 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
RAB28-205ENST00000508274 BRCA2P51587 3418 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 CDK5RAP2Q96SN8 1893 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 RGS19P49795 217 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
RAB28-205ENST00000508274 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
RAB28-205ENST00000508274 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 DOCK1Q14185 1865 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
RAB28-205ENST00000508274 BTBD19C9JJ37 291 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 FBXO46Q6PJ61 603 aaPredicted RBP17.53■□□□□ 0.4
RAB28-205ENST00000508274 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
RAB28-205ENST00000508274 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
RAB28-205ENST00000508274 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 TRIM17Q9Y577 477 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 PHF20L1A8MW92 1017 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 CYP2E1P05181 493 aaPredicted RBP17.53■□□□□ 0.4
RAB28-205ENST00000508274 CETPP11597 493 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 GSTO1P78417 241 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 PPATQ06203 517 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 SNAPC2Q13487 334 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 NOL9Q5SY16 702 aaKnown RBP17.53■□□□□ 0.4
RAB28-205ENST00000508274 OTOP1Q7RTM1 612 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 RCAN3Q9UKA8 241 aa17.53■□□□□ 0.4
RAB28-205ENST00000508274 PHIPQ8WWQ0 1821 aa17.52■□□□□ 0.4
RAB28-205ENST00000508274 ZAP70P43403 619 aa17.52■□□□□ 0.39
RAB28-205ENST00000508274 PTPRFP10586 1907 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 LDHCP07864 332 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 SP3Q02447 781 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 MLLT1Q03111 559 aaPredicted RBP17.51■□□□□ 0.39
RAB28-205ENST00000508274 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 ZFYVE28Q9HCC9 887 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 PIH1D3Q9NQM4 214 aaKnown RBP17.51■□□□□ 0.39
RAB28-205ENST00000508274 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 FOCADQ5VW36 1801 aa17.51■□□□□ 0.39
RAB28-205ENST00000508274 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 MS4A1P11836 297 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
RAB28-205ENST00000508274 SCYL3Q8IZE3 742 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 ZNF512BQ96KM6 892 aaPredicted RBP17.5■□□□□ 0.39
RAB28-205ENST00000508274 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.5■□□□□ 0.39
RAB28-205ENST00000508274 KCNH4Q9UQ05 1017 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
RAB28-205ENST00000508274 MKI67P46013 3256 aaKnown RBP17.5■□□□□ 0.39
RAB28-205ENST00000508274 MAP3K10Q02779 954 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
RAB28-205ENST00000508274 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 AATFQ9NY61 560 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB28-205ENST00000508274 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 MOGSQ13724 837 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 AACSQ86V21 672 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 SIRT2Q8IXJ6 389 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
RAB28-205ENST00000508274 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
RAB28-205ENST00000508274 APBB1O00213 710 aa17.48■□□□□ 0.39
RAB28-205ENST00000508274 PTPRAP18433 802 aa17.48■□□□□ 0.39
RAB28-205ENST00000508274 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
RAB28-205ENST00000508274 CCDC84Q86UT8 332 aaPredicted RBP17.48■□□□□ 0.39
RAB28-205ENST00000508274 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
RAB28-205ENST00000508274 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
RAB28-205ENST00000508274 COL2A1P02458 1487 aaPredicted RBP17.47■□□□□ 0.39
RAB28-205ENST00000508274 TLR2O60603 784 aa17.47■□□□□ 0.39
RAB28-205ENST00000508274 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
RAB28-205ENST00000508274 PICK1Q9NRD5 415 aa17.47■□□□□ 0.39
RAB28-205ENST00000508274 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
RAB28-205ENST00000508274 PDHXO00330 501 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
RAB28-205ENST00000508274 ANKRD23Q86SG2 305 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
RAB28-205ENST00000508274 ARHGAP39Q9C0H5 1083 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 ANTXR1Q9H6X2 564 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
RAB28-205ENST00000508274 ZHX2Q9Y6X8 837 aa17.46■□□□□ 0.39
RAB28-205ENST00000508274 RPAP2Q8IXW5 612 aaPredicted RBP17.45■□□□□ 0.38
RAB28-205ENST00000508274 TBC1D12O60347 775 aa17.45■□□□□ 0.38
RAB28-205ENST00000508274 CTNND1O60716 968 aaKnown RBP17.45■□□□□ 0.38
RAB28-205ENST00000508274 IDH1O75874 414 aaKnown RBP17.45■□□□□ 0.38
RAB28-205ENST00000508274 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
RAB28-205ENST00000508274 BAG3O95817 575 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms