RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 COL2A1P02458 1487 aaPredicted RBP18.12■□□□□ 0.49
RNF4-210ENST00000508235 SSC5DA1L4H1 1573 aa18.12■□□□□ 0.49
RNF4-210ENST00000508235 TCRBV5S4A2TA0A5A2 114 aa18.11■□□□□ 0.49
RNF4-210ENST00000508235 ERICH6BQ5W0A0 696 aa18.11■□□□□ 0.49
RNF4-210ENST00000508235 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
RNF4-210ENST00000508235 CCDC102AQ96A19 550 aa18.11■□□□□ 0.49
RNF4-210ENST00000508235 EVI5LQ96CN4 794 aa18.11■□□□□ 0.49
RNF4-210ENST00000508235 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
RNF4-210ENST00000508235 PRKG1Q13976 671 aa18.1■□□□□ 0.49
RNF4-210ENST00000508235 TICAM2Q86XR7 235 aa18.1■□□□□ 0.49
RNF4-210ENST00000508235 FSD1Q9BTV5 496 aa18.1■□□□□ 0.49
RNF4-210ENST00000508235 OSBPL5Q9H0X9 879 aaPredicted RBP18.1■□□□□ 0.49
RNF4-210ENST00000508235 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
RNF4-210ENST00000508235 UBE2Q2LH0YL09 131 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 RNF113AO15541 343 aaKnown RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 USP2O75604 605 aaPredicted RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 USP5P45974 858 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 ZNF157P51786 506 aaPredicted RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 DYNLL1P63167 89 aaKnown RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 MOB2Q70IA6 237 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 ANKRD13AQ8IZ07 590 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 TGFBRAP1Q8WUH2 860 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 CAPNS2Q96L46 248 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 CSRNP1Q96S65 589 aa18.09■□□□□ 0.49
RNF4-210ENST00000508235 RIOK1Q9BRS2 568 aaKnown RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 CRNKL1Q9BZJ0 848 aaKnown RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 DHX36Q9H2U1 1008 aaKnown RBP18.09■□□□□ 0.49
RNF4-210ENST00000508235 MYH1P12882 1939 aa18.08■□□□□ 0.49
RNF4-210ENST00000508235 FLT1P17948 1338 aa18.08■□□□□ 0.49
RNF4-210ENST00000508235 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.49
RNF4-210ENST00000508235 VEGFBP49765 207 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 LDLRAD1Q5T700 205 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 CYP4F22Q6NT55 531 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 CDAN1Q8IWY9 1227 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 APPBP2Q92624 585 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.48
RNF4-210ENST00000508235 OTOFQ9HC10 1997 aa18.07■□□□□ 0.48
RNF4-210ENST00000508235 DDTLA6NHG4 134 aaPredicted RBP18.06■□□□□ 0.48
RNF4-210ENST00000508235 TRIM6-TRIM34B2RNG4 842 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 HLA-DOAP06340 250 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 MAP2K2P36507 400 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 MAP3K9P80192 1104 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 NOGQ13253 232 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 GRM1Q13255 1194 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 MAPKAPK5Q8IW41 473 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 SLC10A4Q96EP9 437 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 DDRGK1Q96HY6 314 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 PI4KBQ9UBF8 816 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 CSADQ9Y600 493 aa18.06■□□□□ 0.48
RNF4-210ENST00000508235 NAV1Q8NEY1 1877 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 TBC1D12O60347 775 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 MBD4O95243 580 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 SLC10A3P09131 477 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 SH3BP5LQ7L8J4 393 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 LCORLQ8N3X6 602 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 JMYQ8N9B5 988 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.05■□□□□ 0.48
RNF4-210ENST00000508235 WRNIP1Q96S55 665 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 FZD1Q9UP38 647 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
RNF4-210ENST00000508235 PDE4AP27815 886 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 MAP3K10Q02779 954 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 FOXP4Q8IVH2 680 aaPredicted RBP18.04■□□□□ 0.48
RNF4-210ENST00000508235 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
RNF4-210ENST00000508235 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 TRIM34Q9BYJ4 488 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 PUS7LQ9H0K6 701 aaKnown RBP18.04■□□□□ 0.48
RNF4-210ENST00000508235 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
RNF4-210ENST00000508235 HERC5Q9UII4 1024 aaKnown RBP18.04■□□□□ 0.48
RNF4-210ENST00000508235 FAM155AB1AL88 458 aaPredicted RBP18.03■□□□□ 0.48
RNF4-210ENST00000508235 GNAT2P19087 354 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 SLFNL1Q499Z3 407 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.03■□□□□ 0.48
RNF4-210ENST00000508235 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
RNF4-210ENST00000508235 ZBTB48P10074 688 aaPredicted RBP18.02■□□□□ 0.48
RNF4-210ENST00000508235 VGLL4Q14135 290 aa18.02■□□□□ 0.48
RNF4-210ENST00000508235 DDX60LQ5H9U9 1706 aaKnown RBP18.02■□□□□ 0.48
RNF4-210ENST00000508235 ZMYM1Q5SVZ6 1142 aa18.02■□□□□ 0.48
RNF4-210ENST00000508235 TTC22Q5TAA0 569 aa18.02■□□□□ 0.48
RNF4-210ENST00000508235 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.02■□□□□ 0.48
RNF4-210ENST00000508235 CRACR2BQ8N4Y2 399 aaPredicted RBP18.02■□□□□ 0.48
RNF4-210ENST00000508235 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
RNF4-210ENST00000508235 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
RNF4-210ENST00000508235 SLC4A4Q9Y6R1 1079 aa18.02■□□□□ 0.48
RNF4-210ENST00000508235 HIP1O00291 1037 aa18.01■□□□□ 0.47
RNF4-210ENST00000508235 CHGBP05060 677 aa18.01■□□□□ 0.47
RNF4-210ENST00000508235 POLR3DP05423 398 aaPredicted RBP18.01■□□□□ 0.47
RNF4-210ENST00000508235 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
RNF4-210ENST00000508235 SDR42E1Q8WUS8 393 aa18.01■□□□□ 0.47
RNF4-210ENST00000508235 CLMNQ96JQ2 1002 aa18.01■□□□□ 0.47
RNF4-210ENST00000508235 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms