RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 SLURP2P0DP57 97 aa21.75■■□□□ 1.07
SFXN1-207ENST00000507395 PPATQ06203 517 aa21.75■■□□□ 1.07
SFXN1-207ENST00000507395 TLR7Q9NYK1 1049 aaKnown RBP21.75■■□□□ 1.07
SFXN1-207ENST00000507395 TNRC18O15417 2968 aaPredicted RBP21.75■■□□□ 1.07
SFXN1-207ENST00000507395 NPM3O75607 178 aaKnown RBP21.74■■□□□ 1.07
SFXN1-207ENST00000507395 MYO5AQ9Y4I1 1855 aaKnown RBP21.73■■□□□ 1.07
SFXN1-207ENST00000507395 CYP2E1P05181 493 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-207ENST00000507395 OS9Q13438 667 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-207ENST00000507395 MOGSQ13724 837 aa21.73■■□□□ 1.07
SFXN1-207ENST00000507395 FBXO46Q6PJ61 603 aaPredicted RBP21.73■■□□□ 1.07
SFXN1-207ENST00000507395 SNRKQ9NRH2 765 aa21.73■■□□□ 1.07
SFXN1-207ENST00000507395 KCNH4Q9UQ05 1017 aa21.73■■□□□ 1.07
SFXN1-207ENST00000507395 CENPFP49454 3210 aa21.73■■□□□ 1.07
SFXN1-207ENST00000507395 MAST2Q6P0Q8 1798 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 BTBD19C9JJ37 291 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 CETPP11597 493 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 CCDC158Q5M9N0 1113 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 TTC39AQ5SRH9 613 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 OTOP1Q7RTM1 612 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 SIRT2Q8IXJ6 389 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 CCDC8Q9H0W5 538 aaPredicted RBP21.72■■□□□ 1.07
SFXN1-207ENST00000507395 ZBTB40Q9NUA8 1239 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 RAI14Q9P0K7 980 aa21.72■■□□□ 1.07
SFXN1-207ENST00000507395 MAP4K4O95819 1239 aaPredicted RBP21.71■■□□□ 1.07
SFXN1-207ENST00000507395 LDHCP07864 332 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 MS4A1P11836 297 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 GSTO1P78417 241 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 SNAPC2Q13487 334 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 ZCCHC17Q9NP64 241 aaKnown RBP21.71■■□□□ 1.07
SFXN1-207ENST00000507395 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 EXOC6BQ9Y2D4 811 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
SFXN1-207ENST00000507395 ZAP70P43403 619 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 SP3Q02447 781 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 PICALMQ13492 652 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 TAF1CQ15572 869 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-207ENST00000507395 ADGRA1Q86SQ6 560 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 CD99L2Q8TCZ2 262 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 LRP2BPQ9P2M1 347 aa21.7■■□□□ 1.06
SFXN1-207ENST00000507395 COL2A1P02458 1487 aaPredicted RBP21.7■■□□□ 1.06
SFXN1-207ENST00000507395 PHIPQ8WWQ0 1821 aa21.69■■□□□ 1.06
SFXN1-207ENST00000507395 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
SFXN1-207ENST00000507395 ZFYVE28Q9HCC9 887 aa21.69■■□□□ 1.06
SFXN1-207ENST00000507395 PIH1D3Q9NQM4 214 aaKnown RBP21.69■■□□□ 1.06
SFXN1-207ENST00000507395 TBC1D12O60347 775 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 PPP4CP60510 307 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 ERO1AQ96HE7 468 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 DDX19BQ9UMR2 479 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 TRIM17Q9Y577 477 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 CDK5RAP2Q96SN8 1893 aa21.68■■□□□ 1.06
SFXN1-207ENST00000507395 SIPA1L1O43166 1804 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 TLR2O60603 784 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 IGSF3O75054 1194 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 SOX10P56693 466 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 MLLT1Q03111 559 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-207ENST00000507395 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 ZSCAN29Q8IWY8 852 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-207ENST00000507395 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-207ENST00000507395 SCYL3Q8IZE3 742 aa21.67■■□□□ 1.06
SFXN1-207ENST00000507395 SH3RF3Q8TEJ3 882 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-207ENST00000507395 OSBPL5Q9H0X9 879 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-207ENST00000507395 DOCK1Q14185 1865 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 FOCADQ5VW36 1801 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 BRCA2P51587 3418 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 PTPRAP18433 802 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 NAA16Q6N069 864 aaPredicted RBP21.66■■□□□ 1.06
SFXN1-207ENST00000507395 ANKRD23Q86SG2 305 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 ERC1Q8IUD2 1116 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
SFXN1-207ENST00000507395 ADGRA2Q96PE1 1338 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 ZSWIM8A7E2V4 1837 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 CXCL11O14625 94 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 CTNND1O60716 968 aaKnown RBP21.65■■□□□ 1.06
SFXN1-207ENST00000507395 GPAT2Q6NUI2 795 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 TEX11Q8IYF3 940 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 PTPN22Q9Y2R2 807 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 AFG3L2Q9Y4W6 797 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 PTPRFP10586 1907 aa21.65■■□□□ 1.06
SFXN1-207ENST00000507395 FAM196BA6NMK8 535 aa21.64■■□□□ 1.05
SFXN1-207ENST00000507395 RRP1BQ14684 758 aaKnown RBP21.64■■□□□ 1.05
SFXN1-207ENST00000507395 C17orf99Q6UX52 265 aa21.64■■□□□ 1.05
SFXN1-207ENST00000507395 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
SFXN1-207ENST00000507395 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
SFXN1-207ENST00000507395 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
SFXN1-207ENST00000507395 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.64■■□□□ 1.05
SFXN1-207ENST00000507395 NDUFB9Q9Y6M9 179 aa21.64■■□□□ 1.05
SFXN1-207ENST00000507395 A0A0G2JLL6 359 aaPredicted RBP21.63■■□□□ 1.05
SFXN1-207ENST00000507395 PRRT2Q7Z6L0 340 aaPredicted RBP21.63■■□□□ 1.05
SFXN1-207ENST00000507395 AACSQ86V21 672 aa21.63■■□□□ 1.05
SFXN1-207ENST00000507395 EFCC1Q9HA90 598 aa21.63■■□□□ 1.05
SFXN1-207ENST00000507395 ZHX2Q9Y6X8 837 aa21.63■■□□□ 1.05
SFXN1-207ENST00000507395 PDHXO00330 501 aa21.62■■□□□ 1.05
SFXN1-207ENST00000507395 PDE3AQ14432 1141 aa21.62■■□□□ 1.05
SFXN1-207ENST00000507395 HSP90AB4PQ58FF6 505 aa21.62■■□□□ 1.05
SFXN1-207ENST00000507395 BAG3O95817 575 aa21.61■■□□□ 1.05
SFXN1-207ENST00000507395 METTL16Q86W50 562 aaKnown RBP21.61■■□□□ 1.05
SFXN1-207ENST00000507395 ARHGAP39Q9C0H5 1083 aa21.61■■□□□ 1.05
SFXN1-207ENST00000507395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.61■■□□□ 1.05
SFXN1-207ENST00000507395 PICK1Q9NRD5 415 aa21.61■■□□□ 1.05
SFXN1-207ENST00000507395 FLT1P17948 1338 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms