RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 FRMPD3Q5JV73 1810 aa11.34□□□□□ -0.59
COPS4-204ENST00000506443 GRM8O00222 908 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 GNRH1P01148 92 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
COPS4-204ENST00000506443 TNNI2P48788 182 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
COPS4-204ENST00000506443 PPATQ06203 517 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 FBXO33Q7Z6M2 555 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 PAK6Q9NQU5 681 aaPredicted RBP11.33□□□□□ -0.6
COPS4-204ENST00000506443 LOC285556D6RIA3 1793 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 FANCIQ9NVI1 1328 aa11.33□□□□□ -0.6
COPS4-204ENST00000506443 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 MAST2Q6P0Q8 1798 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 FCGRTP55899 365 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 UBXN2AP68543 259 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 FAM161BQ96MY7 647 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 GUCD1Q96NT3 240 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 ZNF341Q9BYN7 854 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
COPS4-204ENST00000506443 LAMA2P24043 3122 aaKnown RBP11.32□□□□□ -0.6
COPS4-204ENST00000506443 TFRCP02786 760 aaKnown RBP11.31□□□□□ -0.6
COPS4-204ENST00000506443 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 VGLL2Q8N8G2 317 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
COPS4-204ENST00000506443 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
COPS4-204ENST00000506443 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 CDH23Q9H251 3354 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 PFASO15067 1338 aa11.31□□□□□ -0.6
COPS4-204ENST00000506443 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 TTC28Q96AY4 2481 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 TNPO2O14787 897 aaKnown RBP11.3□□□□□ -0.6
COPS4-204ENST00000506443 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
COPS4-204ENST00000506443 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 CDC42EP5Q6NZY7 148 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS4-204ENST00000506443 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 MYH2Q9UKX2 1941 aa11.3□□□□□ -0.6
COPS4-204ENST00000506443 COL2A1P02458 1487 aaPredicted RBP11.3□□□□□ -0.6
COPS4-204ENST00000506443 WDHD1O75717 1129 aaPredicted RBP11.29□□□□□ -0.6
COPS4-204ENST00000506443 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
COPS4-204ENST00000506443 PRDX5P30044 214 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 NOL9Q5SY16 702 aaKnown RBP11.29□□□□□ -0.6
COPS4-204ENST00000506443 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 ANKRD13CQ8N6S4 541 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 ANKRD44Q8N8A2 993 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 C9orf78Q9NZ63 289 aaPredicted RBP11.29□□□□□ -0.6
COPS4-204ENST00000506443 TMOD2Q9NZR1 351 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 RAPGEFL1Q9UHV5 662 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 SIPA1L1O43166 1804 aa11.29□□□□□ -0.6
COPS4-204ENST00000506443 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
COPS4-204ENST00000506443 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 HOXD10P28358 340 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
COPS4-204ENST00000506443 TBC1D22AQ8WUA7 517 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 UTYO14607 1347 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
COPS4-204ENST00000506443 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 PDE8BO95263 885 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 PTPRAP18433 802 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 MDM2Q00987 491 aaPredicted RBP11.27□□□□□ -0.61
COPS4-204ENST00000506443 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
COPS4-204ENST00000506443 METTL24Q5JXM2 366 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 TDHQ8IZJ6 230 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 FAM151AQ8WW52 585 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 TRIB2Q92519 343 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
COPS4-204ENST00000506443 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
COPS4-204ENST00000506443 ZHX2Q9Y6X8 837 aa11.27□□□□□ -0.61
COPS4-204ENST00000506443 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
COPS4-204ENST00000506443 BMP8BP34820 402 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 LRIT3Q3SXY7 679 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 SLC4A10Q6U841 1118 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
COPS4-204ENST00000506443 SRCIN1Q9C0H9 1055 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 DDX4Q9NQI0 724 aaKnown RBP11.26□□□□□ -0.61
COPS4-204ENST00000506443 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
COPS4-204ENST00000506443 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
COPS4-204ENST00000506443 RPTORQ8N122 1335 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms