RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 CDK5RAP2Q96SN8 1893 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 WDR19Q8NEZ3 1342 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 TIAM2Q8IVF5 1701 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 PSMD14O00487 310 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 SLC3A2P08195 630 aaKnown RBP21.1■□□□□ 0.97
ITGA3-207ENST00000506401 CUL4AQ13619 759 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 TOB2Q14106 344 aaPredicted RBP21.1■□□□□ 0.97
ITGA3-207ENST00000506401 FOXD4L1Q9NU39 408 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 MKRN1Q9UHC7 482 aaKnown RBP21.1■□□□□ 0.97
ITGA3-207ENST00000506401 SERPINA10Q9UK55 444 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 COL4A5P29400 1685 aa21.1■□□□□ 0.97
ITGA3-207ENST00000506401 PCP11498 1178 aaKnown RBP21.09■□□□□ 0.97
ITGA3-207ENST00000506401 RBM5P52756 815 aaKnown RBP eCLIP21.09■□□□□ 0.97
ITGA3-207ENST00000506401 ZDHHC15Q96MV8 337 aa21.09■□□□□ 0.97
ITGA3-207ENST00000506401 PRC1O43663 620 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 MAPKAPK5Q8IW41 473 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 LRRC2Q9BYS8 371 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 TOMM22Q9NS69 142 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 USP40Q9NVE5 1235 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 NAV1Q8NEY1 1877 aa21.08■□□□□ 0.97
ITGA3-207ENST00000506401 CYP2D7A0A087X1C5 515 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 B4E1Z4 1266 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 CHST3Q7LGC8 479 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 FBXL16Q8N461 479 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 INTS4Q96HW7 963 aaKnown RBP21.08■□□□□ 0.96
ITGA3-207ENST00000506401 TPCN1Q9ULQ1 816 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 LAMB1P07942 1786 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 NEDD4P46934 1319 aa21.08■□□□□ 0.96
ITGA3-207ENST00000506401 GOLGB1Q14789 3259 aaKnown RBP21.07■□□□□ 0.96
ITGA3-207ENST00000506401 USP17L8P0C7I0 530 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 APOBEC3HQ6NTF7 200 aaKnown RBP21.07■□□□□ 0.96
ITGA3-207ENST00000506401 BRF1Q92994 677 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 AGXT2Q9BYV1 514 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 CWC22Q9HCG8 908 aaKnown RBP21.07■□□□□ 0.96
ITGA3-207ENST00000506401 INCENPQ9NQS7 918 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 HDAC9Q9UKV0 1011 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 FOCADQ5VW36 1801 aa21.07■□□□□ 0.96
ITGA3-207ENST00000506401 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
ITGA3-207ENST00000506401 RASSF7Q02833 373 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 CXCL9Q07325 125 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 TNIP1Q15025 636 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 RRP12Q5JTH9 1297 aaKnown RBP21.06■□□□□ 0.96
ITGA3-207ENST00000506401 C12orf60Q5U649 245 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 CIAPIN1Q6FI81 312 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 STK11IPQ8N1F8 1099 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 SYT17Q9BSW7 474 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 MYH1P12882 1939 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 ME3Q16798 604 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 CDC42EP5Q6NZY7 148 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 AGBL3Q8NEM8 1001 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 TACC3Q9Y6A5 838 aa21.06■□□□□ 0.96
ITGA3-207ENST00000506401 ADAMTSL1Q8N6G6 1762 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 KDM4AO75164 1064 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 ANTXR2P58335 489 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 PDE4BQ07343 736 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 CYB5R4Q7L1T6 521 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 OGFOD1Q8N543 542 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 ESR2Q92731 530 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 GMLQ99445 158 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 ZSWIM5Q9P217 1185 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 FLT1P17948 1338 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 ECM29Q5VYK3 1845 aa21.05■□□□□ 0.96
ITGA3-207ENST00000506401 FGRP09769 529 aa21.04■□□□□ 0.96
ITGA3-207ENST00000506401 CYP2D6P10635 497 aa21.04■□□□□ 0.96
ITGA3-207ENST00000506401 ARHGAP27Q6ZUM4 889 aa21.04■□□□□ 0.96
ITGA3-207ENST00000506401 SAP30BPQ9UHR5 308 aaKnown RBP21.04■□□□□ 0.96
ITGA3-207ENST00000506401 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.04■□□□□ 0.96
ITGA3-207ENST00000506401 LARGE1O95461 756 aa21.04■□□□□ 0.96
ITGA3-207ENST00000506401 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
ITGA3-207ENST00000506401 APOBRQ0VD83 1088 aa21.03■□□□□ 0.96
ITGA3-207ENST00000506401 CFAP100Q494V2 611 aa21.03■□□□□ 0.96
ITGA3-207ENST00000506401 MTA3Q9BTC8 594 aa21.03■□□□□ 0.96
ITGA3-207ENST00000506401 CIZ1Q9ULV3 898 aaPredicted RBP21.03■□□□□ 0.96
ITGA3-207ENST00000506401 ZBTB12Q9Y330 459 aaPredicted RBP21.03■□□□□ 0.96
ITGA3-207ENST00000506401 SMIM22K7EJ46 135 aa21.02■□□□□ 0.96
ITGA3-207ENST00000506401 ORC4O43929 436 aa21.02■□□□□ 0.96
ITGA3-207ENST00000506401 WDHD1O75717 1129 aaPredicted RBP21.02■□□□□ 0.96
ITGA3-207ENST00000506401 EIF6P56537 245 aaKnown RBP21.02■□□□□ 0.96
ITGA3-207ENST00000506401 PICALMQ13492 652 aa21.02■□□□□ 0.96
ITGA3-207ENST00000506401 SART3Q15020 963 aaKnown RBP21.02■□□□□ 0.96
ITGA3-207ENST00000506401 CCDC83Q8IWF9 413 aa21.02■□□□□ 0.96
ITGA3-207ENST00000506401 ANGEL1Q9UNK9 670 aaKnown RBP21.02■□□□□ 0.96
ITGA3-207ENST00000506401 DDIT3P35638 169 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 NT5C2P49902 561 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 SLC4A8Q2Y0W8 1093 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 ZNF274Q96GC6 653 aaPredicted RBP21.01■□□□□ 0.95
ITGA3-207ENST00000506401 ZNF287Q9HBT7 754 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.01■□□□□ 0.95
ITGA3-207ENST00000506401 ROBO3Q96MS0 1386 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 ERICH2A1L162 156 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 IFIT3O14879 490 aaKnown RBP21.01■□□□□ 0.95
ITGA3-207ENST00000506401 RANBP6O60518 1105 aaKnown RBP21.01■□□□□ 0.95
ITGA3-207ENST00000506401 MMP14P50281 582 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 STK3Q13188 491 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 NECAB1Q8N987 351 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 CHMP4CQ96CF2 233 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 NAP1L2Q9ULW6 460 aaPredicted RBP21.01■□□□□ 0.95
ITGA3-207ENST00000506401 PCDHAC2Q9Y5I4 1007 aa21.01■□□□□ 0.95
ITGA3-207ENST00000506401 SH2B2O14492 632 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms