RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 INPP5BP32019 993 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 EIF4A1P60842 406 aaKnown RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 GTF2IP78347 998 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 CACNB2Q08289 660 aaPredicted RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 DCTN1Q14203 1278 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 HERVK_113Q902F9 699 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 WRNIP1Q96S55 665 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 ISCA1Q9BUE6 129 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 ZNF70Q9UC06 446 aaPredicted RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 RALYQ9UKM9 306 aaKnown RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 TAOK2Q9UL54 1235 aa4.51□□□□□ -1.69
TCOF1-208ENST00000506063 RPAP1Q9BWH6 1393 aaPredicted RBP4.51□□□□□ -1.69
TCOF1-208ENST00000506063 MAST4O15021 2626 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 DOCK1Q14185 1865 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FAM110CQ1W6H9 321 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 TRIM60Q495X7 471 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 CDCA8Q53HL2 280 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 C16orf59Q7L2K0 433 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 ASCL5Q7RTU5 278 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FAM178BQ8IXR5 827 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 ANKRD13CQ8N6S4 541 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FBXW7Q969H0 707 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 COA7Q96BR5 231 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 TDRD3Q9H7E2 651 aaKnown RBP4.5□□□□□ -1.69
TCOF1-208ENST00000506063 IGSF5Q9NSI5 407 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FAM86C1Q9NVL1 165 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 YBX2Q9Y2T7 364 aaKnown RBP4.5□□□□□ -1.69
TCOF1-208ENST00000506063 MTCH2Q9Y6C9 303 aa4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FLNBO75369 2602 aaKnown RBP4.5□□□□□ -1.69
TCOF1-208ENST00000506063 FRYLO94915 3013 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 DOCK2Q92608 1830 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 A0A0G2JLL6 359 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 TCP10L2B9ZVM9 353 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 PROB1E7EW31 1015 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 IRS4O14654 1257 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 MYO1BO43795 1136 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 IGHA2P01877 340 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 XRCC5P13010 732 aaKnown RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 ID4P47928 161 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 CCT4P50991 539 aaKnown RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 PTPN5P54829 565 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 TNFAIP1Q13829 316 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 HSP90AB3PQ58FF7 597 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 C1orf53Q5VUE5 145 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 KRT40Q6A162 431 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 SLC39A5Q6ZMH5 540 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 COPS6Q7L5N1 327 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 PRRT2Q7Z6L0 340 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 MORC1Q86VD1 984 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 GJD3Q8N144 294 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 USP6NLQ92738 828 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.49□□□□□ -1.698e-9■□□□□ 10.5
TCOF1-208ENST00000506063 TSPYL2Q9H2G4 693 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 PRDM5Q9NQX1 630 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 BSDC1Q9NW68 430 aaPredicted RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 PRKAG2Q9UGJ0 569 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 ZNF112Q9UJU3 913 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 MINPP1Q9UNW1 487 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 COG5Q9UP83 839 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 ATP11BQ9Y2G3 1177 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 SLC45A1Q9Y2W3 748 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 ZFYVE26Q68DK2 2539 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 SPEGQ15772 3267 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 ASH1LQ9NR48 2969 aaKnown RBP4.49□□□□□ -1.69
TCOF1-208ENST00000506063 NAV2Q8IVL1 2488 aa4.49□□□□□ -1.69
TCOF1-208ENST00000506063 GAKO14976 1311 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 PTPRSQ13332 1948 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 EPOPA6NHQ4 379 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 F8W031 263 aaPredicted RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 DNM1LO00429 736 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 KIAA0355O15063 1070 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 DCXO43602 365 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 DIAPH1O60610 1272 aaKnown RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 ALADP13716 330 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 FKBP1AP62942 108 aaKnown RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 ACAP1Q15027 740 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 TAF7Q15545 349 aaPredicted RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 CCL14Q16627 93 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 RTL5Q5HYW3 569 aaPredicted RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 TMEM240Q5SV17 173 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 NOL9Q5SY16 702 aaKnown RBP4.48□□□□□ -1.69
TCOF1-208ENST00000506063 MICALL1Q8N3F8 863 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 XAGE3Q8WTP9 111 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 RSPH6AQ9H0K4 717 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 NKX2-4Q9H2Z4 354 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 CD209Q9NNX6 404 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 ATAD5Q96QE3 1844 aa4.48□□□□□ -1.69
TCOF1-208ENST00000506063 ATG2AQ2TAZ0 1938 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 PRR23AA6NEV1 266 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 ATP5J2-PTCD1G3V325 749 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 RFXAPO00287 272 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 CXCL11O14625 94 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 CYP2B6P20813 491 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 CACNB3P54284 484 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 TLE2Q04725 743 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 FPGSQ05932 587 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 TRIM28Q13263 835 aaKnown RBP4.47□□□□□ -1.69
TCOF1-208ENST00000506063 CSPP1Q1MSJ5 1256 aa4.47□□□□□ -1.69
TCOF1-208ENST00000506063 AMER1Q5JTC6 1135 aaPredicted RBP4.47□□□□□ -1.69
TCOF1-208ENST00000506063 DZIP1LQ8IYY4 767 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms