RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TNNI3KQ59H18 835 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
NR1I3-222ENST00000506018 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 ZCCHC17Q9NP64 241 aaKnown RBP12.79□□□□□ -0.36
NR1I3-222ENST00000506018 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 FPGT-TNNI3KV9GXZ4 949 aa12.79□□□□□ -0.36
NR1I3-222ENST00000506018 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 IGSF3O75054 1194 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 SP3Q02447 781 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 PTPN18Q99952 460 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 TRIM17Q9Y577 477 aa12.78□□□□□ -0.36
NR1I3-222ENST00000506018 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 IRF6O14896 467 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 BAG3O95817 575 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 PICALMQ13492 652 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 ZNF112Q9UJU3 913 aa12.77□□□□□ -0.37
NR1I3-222ENST00000506018 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
NR1I3-222ENST00000506018 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 RLBP1P12271 317 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 PLCG2P16885 1265 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 INPP5BP32019 993 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 MCAMP43121 646 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 KIF22Q14807 665 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 NOL9Q5SY16 702 aaKnown RBP12.76□□□□□ -0.37
NR1I3-222ENST00000506018 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
NR1I3-222ENST00000506018 ZNF512BQ96KM6 892 aaPredicted RBP12.76□□□□□ -0.37
NR1I3-222ENST00000506018 DDX19BQ9UMR2 479 aa12.76□□□□□ -0.37
NR1I3-222ENST00000506018 HMMRO75330 724 aa12.75□□□□□ -0.37
NR1I3-222ENST00000506018 NAA16Q6N069 864 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-222ENST00000506018 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
NR1I3-222ENST00000506018 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
NR1I3-222ENST00000506018 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
NR1I3-222ENST00000506018 EFCC1Q9HA90 598 aa12.75□□□□□ -0.37
NR1I3-222ENST00000506018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-222ENST00000506018 MYO5AQ9Y4I1 1855 aaKnown RBP12.74□□□□□ -0.37
NR1I3-222ENST00000506018 SOX10P56693 466 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 PI16Q6UXB8 463 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-222ENST00000506018 CD99L2Q8TCZ2 262 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 DBNDD2Q9BQY9 259 aa12.74□□□□□ -0.37
NR1I3-222ENST00000506018 COL2A1P02458 1487 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-222ENST00000506018 RFX7Q2KHR2 1363 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 CXCL11O14625 94 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 TLR2O60603 784 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
NR1I3-222ENST00000506018 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
NR1I3-222ENST00000506018 ANKRD23Q86SG2 305 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
NR1I3-222ENST00000506018 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 ATAD5Q96QE3 1844 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
NR1I3-222ENST00000506018 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 TBC1D12O60347 775 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 GNRH1P01148 92 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 RHBDL3P58872 404 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 MAP3K10Q02779 954 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 TMED8Q6PL24 325 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
NR1I3-222ENST00000506018 PTPN22Q9Y2R2 807 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 PTPRFP10586 1907 aa12.72□□□□□ -0.37
NR1I3-222ENST00000506018 NBPF11Q86T75 865 aa12.71□□□□□ -0.37
NR1I3-222ENST00000506018 AACSQ86V21 672 aa12.71□□□□□ -0.37
NR1I3-222ENST00000506018 CLASRPQ8N2M8 674 aaKnown RBP12.71□□□□□ -0.37
NR1I3-222ENST00000506018 PARK7Q99497 189 aaKnown RBP12.71□□□□□ -0.37
NR1I3-222ENST00000506018 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
NR1I3-222ENST00000506018 OSBPL5Q9H0X9 879 aaPredicted RBP12.71□□□□□ -0.37
NR1I3-222ENST00000506018 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.37
NR1I3-222ENST00000506018 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.37
NR1I3-222ENST00000506018 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
NR1I3-222ENST00000506018 ZHX2Q9Y6X8 837 aa12.71□□□□□ -0.37
NR1I3-222ENST00000506018 PHIPQ8WWQ0 1821 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 PDHXO00330 501 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 CYP2E1P05181 493 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-222ENST00000506018 PTPRAP18433 802 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 ZAP70P43403 619 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms