RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 RCAN1P53805 252 aa17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 DYNLL1P63167 89 aaKnown RBP17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 MECOMQ03112 1051 aa17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 SPTY2D1Q68D10 685 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 FTOQ9C0B1 505 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 NID2Q14112 1375 aa17.96■□□□□ 0.47
SNCAIP-207ENST00000504884 STK36Q9NRP7 1315 aa17.96■□□□□ 0.46
SNCAIP-207ENST00000504884 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 CTAGE5O15320 804 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 YEATS4O95619 227 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 KIF23Q02241 960 aaPredicted RBP17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 WASF1Q92558 559 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 POLR3EQ9NVU0 708 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 ANKIB1Q9P2G1 1089 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 IFNAR1P17181 557 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 ME1P48163 572 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 TYRO3Q06418 890 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 CCDC73Q6ZRK6 1079 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 KCNG4Q8TDN1 519 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 PHKBQ93100 1093 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 CCDC39Q9UFE4 941 aa17.95■□□□□ 0.46
SNCAIP-207ENST00000504884 CHAF1AQ13111 956 aaPredicted RBP17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 TRIM29Q14134 588 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 PPP2R5BQ15173 497 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 ADALQ6DHV7 355 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 GJB4Q9NTQ9 266 aa17.94■□□□□ 0.46
SNCAIP-207ENST00000504884 FMNL1O95466 1100 aaPredicted RBP17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 FGRP09769 529 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 GYS1P13807 737 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 STK38Q15208 465 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 RTN1Q16799 776 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 KRT40Q6A162 431 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 SASS6Q6UVJ0 657 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 CKAP2LQ8IYA6 745 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 PCDHA7Q9UN72 937 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 XDHP47989 1333 aa17.93■□□□□ 0.46
SNCAIP-207ENST00000504884 A0A1W2PQ27 194 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 A0A1W2PQ64 194 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 A0A1W2PQD8 194 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 ST5P78524 1137 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 WDR66Q8TBY9 1149 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 FAM200AQ8TCP9 573 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 ATP8A2Q9NTI2 1148 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 CLIC4Q9Y696 253 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 MRVI1Q9Y6F6 885 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 RANBP6O60518 1105 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 SERPINB2P05120 415 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 FAM160A1Q05DH4 1040 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 C15orf52Q6ZUT6 534 aaKnown RBP17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 KRT27Q7Z3Y8 459 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 TRIM22Q8IYM9 498 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 ENGASEQ8NFI3 743 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
SNCAIP-207ENST00000504884 KIF28PB7ZC32 967 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 SPTLC2O15270 562 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 CAVIN2O95810 425 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 PRDX5P30044 214 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 SNW1Q13573 536 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 SEC23AQ15436 765 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 FANCBQ8NB91 859 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 AATFQ9NY61 560 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
SNCAIP-207ENST00000504884 USP17L12C9JPN9 530 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 USP17L21D6R901 530 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 ZNF654Q8IZM8 581 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 FSIP1Q8NA03 581 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 MRPS27Q92552 414 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 ZSCAN10Q96SZ4 725 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 GOLPH3LQ9H4A5 285 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 TNKSO95271 1327 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 ADCY5O95622 1261 aa17.9■□□□□ 0.46
SNCAIP-207ENST00000504884 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms