RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.02
NPIPB3-203ENST00000504841 MYH13Q9UKX3 1938 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 MGAMO43451 1857 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 BRCA2P51587 3418 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 SLC5A1P13866 664 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 RABL6Q3YEC7 729 aaPredicted RBP8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 GPAT2Q6NUI2 795 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 WDR66Q8TBY9 1149 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 MRIQ9BWK5 157 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 MRS2Q9HD23 443 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 USP40Q9NVE5 1235 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 ZNF112Q9UJU3 913 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 ZMYND8Q9ULU4 1186 aaPredicted RBP8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 ZHX2Q9Y6X8 837 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 CENPFP49454 3210 aa8.64□□□□□ -1.03
NPIPB3-203ENST00000504841 CXCL11O14625 94 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 CCDC84Q86UT8 332 aaPredicted RBP8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 C7orf61Q8IZ16 206 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 SCYL3Q8IZE3 742 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 DIS3LQ8TF46 1054 aaKnown RBP8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 PAWRQ96IZ0 340 aaKnown RBP8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 DOCK2Q92608 1830 aa8.63□□□□□ -1.03
NPIPB3-203ENST00000504841 UTYO14607 1347 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 A0A0G2JLL6 359 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 A0A1W2PPC1 479 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 TRIM75PA6NK02 468 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 LDHBP07195 334 aaKnown RBP8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 FGFR2P21802 821 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 RGS3P49796 1198 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 PICALMQ13492 652 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 ANKRD13CQ8N6S4 541 aa8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 LRRFIP2Q9Y608 721 aaKnown RBP8.62□□□□□ -1.03
NPIPB3-203ENST00000504841 EYA2O00167 538 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 PRKAR2AP13861 404 aaKnown RBP8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 SYN1P17600 705 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 PTPRAP18433 802 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 IRF5Q13568 498 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 ATP2B3Q16720 1220 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 Q7L0L9 218 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 NECAB2Q7Z6G3 386 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 LPIN2Q92539 896 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 COA7Q96BR5 231 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 SIL1Q9H173 461 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 DOCK1Q14185 1865 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
NPIPB3-203ENST00000504841 ALPK3Q96L96 1907 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 PHKA1P46020 1223 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 SH3BP5LQ7L8J4 393 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 DEFB123Q8N688 67 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 CRISPLD2Q9H0B8 497 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 ABCF2Q9UG63 623 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 AGTPBP1Q9UPW5 1226 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 AFG3L2Q9Y4W6 797 aa8.6□□□□□ -1.03
NPIPB3-203ENST00000504841 PTPRFP10586 1907 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 DDTLA6NHG4 134 aaPredicted RBP8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 ENTPD3O75355 529 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 BTDP43251 543 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 TRIM32Q13049 653 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 GDF15Q99988 308 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 DDX4Q9NQI0 724 aaKnown RBP8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 SLC45A1Q9Y2W3 748 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 RFX7Q2KHR2 1363 aa8.59□□□□□ -1.03
NPIPB3-203ENST00000504841 DDX60LQ5H9U9 1706 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 CTNND1O60716 968 aaKnown RBP8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 HMGCRP04035 888 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 ADORA1P30542 326 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 MAGEA10P43363 369 aaPredicted RBP8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 SPP2Q13103 211 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 FAM110CQ1W6H9 321 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 ATG9AQ7Z3C6 839 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 NBPF3Q9H094 633 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 USP44Q9H0E7 712 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 C11orf49Q9H6J7 331 aa8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.58□□□□□ -1.04
NPIPB3-203ENST00000504841 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms