RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 SUN1O94901 812 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 C10orf88Q9H8K7 445 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 C6orf203Q9P0P8 240 aaPredicted RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 ZNF229Q9UJW7 825 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 DDHD2O94830 711 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 CYP2C19P33261 490 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 APBA1Q02410 837 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 NRBF2Q96F24 287 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 KIF11P52732 1056 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 FBLN2P98095 1184 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 DHX9Q08211 1270 aaKnown RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 KRT32Q14532 448 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 KANK3Q6NY19 840 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 EGFL6Q8IUX8 553 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
ITGA1-203ENST00000504669 MIA2Q96PC5 1412 aa11.54□□□□□ -0.56
ITGA1-203ENST00000504669 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 CWF19L2Q2TBE0 894 aaKnown RBP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 BBOF1Q8ND07 529 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 P4HA2O15460 535 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PEX14O75381 377 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 MCF2P10911 925 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PAX7P23759 505 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 TRPC1P48995 793 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PAPOLAP51003 745 aaKnown RBP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 DDX42Q86XP3 938 aaKnown RBP eCLIP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 HAUS8Q9BT25 410 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 STX2P32856 288 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 KLC1Q07866 573 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 MYO1EQ12965 1108 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 C6orf118Q5T5N4 469 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 CCDC89Q8N998 374 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PDE5AO76074 875 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 LMNB1P20700 586 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PAX3P23760 479 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 ZNF449Q6P9G9 518 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 CTAGE3PQ8IX95 158 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 PLVAPQ9BX97 442 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
ITGA1-203ENST00000504669 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 E2F6O75461 281 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 FBXW10Q5XX13 1052 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 DENND2CQ68D51 928 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 GDAP1L1Q96MZ0 367 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 ZBTB21Q9ULJ3 1066 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
ITGA1-203ENST00000504669 TADA3O75528 432 aa11.52□□□□□ -0.56
ITGA1-203ENST00000504669 IGBP1P78318 339 aa11.52□□□□□ -0.56
ITGA1-203ENST00000504669 ZNF483Q8TF39 744 aaPredicted RBP11.52□□□□□ -0.56
ITGA1-203ENST00000504669 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.56
ITGA1-203ENST00000504669 BZW2Q9Y6E2 419 aaKnown RBP11.52□□□□□ -0.56
ITGA1-203ENST00000504669 DACT1Q9NYF0 836 aa11.52□□□□□ -0.56
ITGA1-203ENST00000504669 PNMA6AP0CW24 399 aaPredicted RBP11.52□□□□□ -0.57
ITGA1-203ENST00000504669 YY1P25490 414 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 CTNNA1P35221 906 aaKnown RBP11.52□□□□□ -0.57
ITGA1-203ENST00000504669 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 ATP11CQ8NB49 1132 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 CCSER2Q9H7U1 834 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 ZBBXA8MT70 800 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 CAB39Q9Y376 341 aaPredicted RBP11.52□□□□□ -0.57
ITGA1-203ENST00000504669 PPP4R4Q6NUP7 873 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 NAP1L4Q99733 375 aaKnown RBP11.52□□□□□ -0.57
ITGA1-203ENST00000504669 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.57
ITGA1-203ENST00000504669 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 TBC1D1Q86TI0 1168 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 SNX29Q8TEQ0 813 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 UBTFL1P0CB47 393 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 PDE6AP16499 860 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 CYP26C1Q6V0L0 522 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 RABL2AQ9UBK7 228 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 RTL1A6NKG5 1358 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 CLUL1Q15846 466 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 EFHD2Q96C19 240 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 EMC3Q9P0I2 261 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 FBXO9Q9UK97 447 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 TLK1Q9UKI8 766 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 PALM3A6NDB9 673 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 RGS16O15492 202 aaPredicted RBP11.51□□□□□ -0.57
ITGA1-203ENST00000504669 F13A1P00488 732 aa11.51□□□□□ -0.57
ITGA1-203ENST00000504669 TEKT1Q969V4 418 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms