RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SHHQ15465 462 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 FKBP1CQ5VVH2 108 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 TRIB2Q92519 343 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.16
LSM6-204ENST00000504181 SLC45A1Q9Y2W3 748 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 CHMP3Q9Y3E7 222 aa16.02■□□□□ 0.16
LSM6-204ENST00000504181 CASP7P55210 303 aa16.01■□□□□ 0.15
LSM6-204ENST00000504181 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
LSM6-204ENST00000504181 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
LSM6-204ENST00000504181 ZDHHC15Q96MV8 337 aa16.01■□□□□ 0.15
LSM6-204ENST00000504181 ZHX2Q9Y6X8 837 aa16.01■□□□□ 0.15
LSM6-204ENST00000504181 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
LSM6-204ENST00000504181 PLXNA1Q9UIW2 1896 aa16■□□□□ 0.15
LSM6-204ENST00000504181 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
LSM6-204ENST00000504181 TCP10Q12799 353 aa16■□□□□ 0.15
LSM6-204ENST00000504181 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
LSM6-204ENST00000504181 FAM110CQ1W6H9 321 aa16■□□□□ 0.15
LSM6-204ENST00000504181 APOBEC3HQ6NTF7 200 aaKnown RBP16■□□□□ 0.15
LSM6-204ENST00000504181 FAM151AQ8WW52 585 aa16■□□□□ 0.15
LSM6-204ENST00000504181 FAM84BQ96KN1 310 aaPredicted RBP16■□□□□ 0.15
LSM6-204ENST00000504181 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
LSM6-204ENST00000504181 GCKRQ14397 625 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 ADAMTS19Q8TE59 1207 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 ZNF594Q96JF6 807 aaPredicted RBP15.99■□□□□ 0.15
LSM6-204ENST00000504181 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 GJD2Q9UKL4 321 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 REV3LO60673 3130 aa15.99■□□□□ 0.15
LSM6-204ENST00000504181 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
LSM6-204ENST00000504181 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
LSM6-204ENST00000504181 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
LSM6-204ENST00000504181 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
LSM6-204ENST00000504181 SYNGAP1Q96PV0 1343 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 PTPRAP18433 802 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 CYP2B6P20813 491 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 SCYL3Q8IZE3 742 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 SENP6Q9GZR1 1112 aaPredicted RBP15.97■□□□□ 0.15
LSM6-204ENST00000504181 PICK1Q9NRD5 415 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
LSM6-204ENST00000504181 GBF1Q92538 1859 aa15.97■□□□□ 0.15
LSM6-204ENST00000504181 TRIM75PA6NK02 468 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.15
LSM6-204ENST00000504181 CCND3P30281 292 aaPredicted RBP15.96■□□□□ 0.15
LSM6-204ENST00000504181 ATN1P54259 1190 aaPredicted RBP15.96■□□□□ 0.15
LSM6-204ENST00000504181 UBE4AQ14139 1066 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 TAF7LQ5H9L4 462 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 TREML2Q5T2D2 321 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 TBC1D22AQ8WUA7 517 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 PPM1EQ8WY54 764 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 UHRF1Q96T88 793 aaPredicted RBP15.96■□□□□ 0.15
LSM6-204ENST00000504181 AGTPBP1Q9UPW5 1226 aa15.96■□□□□ 0.15
LSM6-204ENST00000504181 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 FOXO4P98177 505 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
LSM6-204ENST00000504181 GRIN2CQ14957 1233 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 LHX8Q68G74 356 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.95■□□□□ 0.14
LSM6-204ENST00000504181 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
LSM6-204ENST00000504181 MAST3O60307 1309 aa15.94■□□□□ 0.14
LSM6-204ENST00000504181 NFIAQ12857 509 aa15.94■□□□□ 0.14
LSM6-204ENST00000504181 CCDC84Q86UT8 332 aaPredicted RBP15.94■□□□□ 0.14
LSM6-204ENST00000504181 ATXN2LQ8WWM7 1075 aaKnown RBP15.94■□□□□ 0.14
LSM6-204ENST00000504181 ASB2Q96Q27 587 aa15.94■□□□□ 0.14
LSM6-204ENST00000504181 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
LSM6-204ENST00000504181 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
LSM6-204ENST00000504181 PIEZO1Q92508 2521 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 PHF20L1A8MW92 1017 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 RTP1P59025 263 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 HHIPL2Q6UWX4 724 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 G2E3Q7L622 706 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 THEGQ9P2T0 379 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 HCN4Q9Y3Q4 1203 aa15.93■□□□□ 0.14
LSM6-204ENST00000504181 ATRNL1Q5VV63 1379 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 GCLCP48506 637 aaPredicted RBP15.92■□□□□ 0.14
LSM6-204ENST00000504181 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 LMBR1LQ6UX01 489 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 ZFPM1Q8IX07 1006 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 BADQ92934 168 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 C1QTNF1Q9BXJ1 281 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 PRDM5Q9NQX1 630 aaPredicted RBP15.92■□□□□ 0.14
LSM6-204ENST00000504181 FAM198AQ9UFP1 575 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 ATP11BQ9Y2G3 1177 aa15.92■□□□□ 0.14
LSM6-204ENST00000504181 ZKSCAN1P17029 563 aaPredicted RBP15.91■□□□□ 0.14
LSM6-204ENST00000504181 CDC42EP5Q6NZY7 148 aa15.91■□□□□ 0.14
LSM6-204ENST00000504181 FBXO33Q7Z6M2 555 aa15.91■□□□□ 0.14
LSM6-204ENST00000504181 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
LSM6-204ENST00000504181 IFT57Q9NWB7 429 aa15.91■□□□□ 0.14
LSM6-204ENST00000504181 MUC6Q6W4X9 2439 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 SLURP2P0DP57 97 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 GNAI1P63096 354 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 CCL14Q16627 93 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 IL27Q8NEV9 243 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 NUDT12Q9BQG2 462 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
LSM6-204ENST00000504181 ARIH1Q9Y4X5 557 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms