RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 MTRF1LQ9UGC7 380 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 STX10O60499 249 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TUBB4AP04350 444 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC6Q16204 474 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 G2E3Q7L622 706 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 WDR66Q8TBY9 1149 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 PKNOX2Q96KN3 472 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 SH3TC1Q8TE82 1336 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 TNNC1P63316 161 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 C8orf34Q49A92 452 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ATL3Q6DD88 541 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 CERS3Q8IU89 383 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 PPP1R9BQ96SB3 815 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 USP26Q9BXU7 913 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 LUC7L2Q9Y383 392 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 PRKG1Q13976 671 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 USH1GQ495M9 461 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 SMC6Q96SB8 1091 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 ANAPC4Q9UJX5 808 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
SYNPO2-205ENST00000504178 MROH5Q6ZUA9 1318 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 A0A1B0GVL5 298 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 ARHGEF35A5YM69 484 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 AKR1B15C9JRZ8 316 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 CFAP157Q5JU67 520 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 LIN9Q5TKA1 542 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 KIF21AQ7Z4S6 1674 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 SH3BP5O60239 455 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 DKC1O60832 514 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 RASA3Q14644 834 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 JAKMIP2Q96AA8 810 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 ZBTB40Q9NUA8 1239 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 PBRM1Q86U86 1689 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 RLBP1P12271 317 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 TXKP42681 527 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 TIMM10P62072 90 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 MCM6Q14566 821 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 VWA3BQ502W6 1294 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 MAEAQ7L5Y9 396 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 SPATA5Q8NB90 893 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 UBLCP1Q8WVY7 318 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 E7EVH7 732 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 ZBTB16Q05516 673 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 CNGA4Q8IV77 575 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 KRT222Q8N1A0 295 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 TRIM6Q9C030 488 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 GLT8D2Q9H1C3 349 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 BABAM1Q9NWV8 329 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 CRCPO75575 148 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 CPA1P15085 419 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 NIM1KQ8IY84 436 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 ATRIPQ8WXE1 791 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
SYNPO2-205ENST00000504178 SLU7O95391 586 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 RHOXF2BP0C7M4 288 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 RILPL1Q5EBL4 403 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 RHOXF2Q9BQY4 288 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 V9GY48 417 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 GPAA1O43292 621 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 DAPK3O43293 454 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 TCP10Q12799 353 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 UAP1Q16222 522 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 LPIN2Q92539 896 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 APPBP2Q92624 585 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 INTS4Q96HW7 963 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 SUCLG2Q96I99 432 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 SEC62Q99442 399 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 SYNRGQ9UMZ2 1314 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 TRIM14Q14142 442 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 TTC38Q5R3I4 469 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 PPP1R21Q6ZMI0 780 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 KLHDC4Q8TBB5 520 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 LEO1Q8WVC0 666 aaPredicted RBP8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 AZI2Q9H6S1 392 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 FAM204AQ9H8W3 233 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ATP10AO60312 1499 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 AOX1Q06278 1338 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 PLXNC1O60486 1568 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 SPOPO43791 374 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 MYL5Q02045 173 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 CALCOCO2Q13137 446 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ARHGEF12Q9NZN5 1544 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ARHGEF10O15013 1369 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ALDH3A1P30838 453 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 IL13P35225 146 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 CCDC122Q5T0U0 273 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 ANO1Q5XXA6 986 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 SYT10Q6XYQ8 523 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 TGFBRAP1Q8WUH2 860 aa8.03□□□□□ -1.12
SYNPO2-205ENST00000504178 BAG1Q99933 345 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms