RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 KDM6AO15550 1401 aaPredicted RBP6.76□□□□□ -1.33
LINC01340-201ENST00000504012 GRIN2DO15399 1336 aa6.76□□□□□ -1.33
LINC01340-201ENST00000504012 COL3A1P02461 1466 aaPredicted RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 ADCY9O60503 1353 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CEMIPQ8WUJ3 1361 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 A0A1W2PQ27 194 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 A0A1W2PQ64 194 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 A0A1W2PQD8 194 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 GOLGA6CA6NDK9 693 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 PFKFB2O60825 505 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 DNAJC8O75937 253 aaPredicted RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 FCHSD2O94868 740 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 GOLGA6DP0CG33 693 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 PAPOLAP51003 745 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CCNG1P51959 295 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 USP14P54578 494 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 NLRP12P59046 1061 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 VSNL1P62760 191 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 FANCCQ00597 558 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 DEUP1Q05D60 604 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 KCNB1Q14721 858 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CMPK2Q5EBM0 449 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 RBM26Q5T8P6 1007 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CYB5D1Q6P9G0 228 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 ARMC9Q7Z3E5 817 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 ARHGAP22Q7Z5H3 698 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC83Q8IWF9 413 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 FUKQ8N0W3 1084 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 GALNT15Q8N3T1 639 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC148Q8NFR7 591 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 OTUD7AQ8TE49 926 aaPredicted RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 THOC1Q96FV9 657 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 ACSBG1Q96GR2 724 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 EPN3Q9H201 632 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 RANBP17Q9H2T7 1088 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 GOLGA6AQ9NYA3 693 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 HOOK1Q9UJC3 728 aaKnown RBP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 TRPC6Q9Y210 931 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 PCDHGC5Q9Y5F6 944 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01340-201ENST00000504012 LMTK2Q8IWU2 1503 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 NSD3Q9BZ95 1437 aa6.75□□□□□ -1.33
LINC01340-201ENST00000504012 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 TDRD9Q8NDG6 1382 aaKnown RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CDC42BPBQ9Y5S2 1711 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 TESPA1A2RU30 521 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CTAGE9A4FU28 777 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 VPS37CA5D8V6 355 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 NDUFAB1O14561 156 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 KIF5CO60282 957 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PSMA5P28066 241 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CNGA1P29973 690 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 GNGT1P63211 74 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 RESTQ13127 1097 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 LAMB3Q13751 1172 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 BLMHQ13867 455 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 RASA3Q14644 834 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PPP4R3AQ6IN85 833 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 DPY19L2Q6NUT2 758 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PRPF40BQ6NWY9 871 aaKnown RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 BZW1Q7L1Q6 419 aaKnown RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC13Q8IYE1 715 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PARD3BQ8TEW8 1205 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC12Q8WUD4 166 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 HDAC7Q8WUI4 952 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CNKSR1Q969H4 720 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PPP1R14BQ96C90 147 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 ZNF396Q96N95 335 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PANX2Q96RD6 677 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 IRX2Q9BZI1 471 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 LSG1Q9H089 658 aaKnown RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 SENP2Q9HC62 589 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 METTL14Q9HCE5 456 aaKnown RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 JADE2Q9NQC1 790 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 INCENPQ9NQS7 918 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 LMCD1Q9NZU5 365 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 KIAA1468Q9P260 1216 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PCDH10Q9P2E7 1040 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 PHF8Q9UPP1 1060 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 CYP46A1Q9Y6A2 500 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 ARHGEF40Q8TER5 1519 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 NPHP4O75161 1426 aaPredicted RBP6.74□□□□□ -1.33
LINC01340-201ENST00000504012 SH3TC1Q8TE82 1336 aa6.74□□□□□ -1.33
LINC01340-201ENST00000504012 SETD1AO15047 1707 aaKnown RBP6.73□□□□□ -1.33
LINC01340-201ENST00000504012 SBNO1A3KN83 1393 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 PNPLA6Q8IY17 1366 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 SPDYE3A6NKU9 549 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 B4DLN1 442 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 AGPSO00116 658 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 NPTXRO95502 500 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 PENKP01210 267 aaPredicted RBP6.73□□□□□ -1.33
LINC01340-201ENST00000504012 CCDC175P0C221 793 aa6.73□□□□□ -1.33
LINC01340-201ENST00000504012 TOP1P11387 765 aaKnown RBP6.73□□□□□ -1.33
LINC01340-201ENST00000504012 CD44P16070 742 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms