RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CTR9Q6PD62 1173 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 Q6ZUG5 572 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 SH3RF3Q8TEJ3 882 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 MCM9Q9NXL9 1143 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 CHMP5Q9NZZ3 219 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 BRCA1P38398 1863 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 YDJCA8MPS7 323 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 MINDY4BA8MYZ0 360 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 F8W031 263 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 PRC1O43663 620 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 ORC4O43929 436 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 POLR3DP05423 398 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 RPS12P25398 132 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 EVCP57679 992 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 RHBDL3P58872 404 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 NUCB2P80303 420 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 CIAPIN1Q6FI81 312 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 ILDR2Q71H61 639 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TBC1D10CQ8IV04 446 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TGFBRAP1Q8WUH2 860 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 ZNF274Q96GC6 653 aaPredicted RBP9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TAF6LQ9Y6J9 622 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 TIAM2Q8IVF5 1701 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 LAMA4Q16363 1823 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 CHD4Q14839 1912 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 MYH2Q9UKX2 1941 aa9.58□□□□□ -0.88
TOPBP1-202ENST00000503338 NFKBIEO00221 500 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 PSMD14O00487 310 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 DHX16O60231 1041 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 CPA1P15085 419 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 LIFRP42702 1097 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 RCAN1P53805 252 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 EIF6P56537 245 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 C12orf60Q5U649 245 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 IQCA1Q86XH1 822 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 IDI2Q9BXS1 227 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 DHX36Q9H2U1 1008 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 TOMM22Q9NS69 142 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 FOXD4L1Q9NU39 408 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 USP40Q9NVE5 1235 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 TMOD2Q9NZR1 351 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 ANGEL1Q9UNK9 670 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 KIF3AQ9Y496 699 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 FER1L6Q2WGJ9 1857 aa9.57□□□□□ -0.88
TOPBP1-202ENST00000503338 FLT1P17948 1338 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 B4E1Z4 1266 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 KDM4AO75164 1064 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 HLA-DOAP06340 250 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 DDIT3P35638 169 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 SCNN1DP51172 638 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 RBM5P52756 815 aaKnown RBP eCLIP9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 CTDSPL2Q05D32 466 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 APOBEC3HQ6NTF7 200 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 SYNE3Q6ZMZ3 975 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 SGMS1Q86VZ5 419 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 BRF1Q92994 677 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 GMLQ99445 158 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 LLPHQ9BRT6 129 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 UBAC1Q9BSL1 405 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 KCNQ5Q9NR82 932 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 TPCN1Q9ULQ1 816 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 NEDD4P46934 1319 aa9.56□□□□□ -0.88
TOPBP1-202ENST00000503338 PSME4Q14997 1843 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 FZD9O00144 591 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 SH2B2O14492 632 aaPredicted RBP9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 IFIT3O14879 490 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 MYO1BO43795 1136 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 PFKFB2O60825 505 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 RAD17O75943 681 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 USP17L8P0C7I0 530 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 PDCP20941 246 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 HMGN5P82970 282 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 CXCL9Q07325 125 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 PPP2R5BQ15173 497 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 DLGAP5Q15398 846 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 ME3Q16798 604 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 CFAP100Q494V2 611 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 RRP12Q5JTH9 1297 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 CDC42EP5Q6NZY7 148 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 MAPKAPK5Q8IW41 473 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 DPF2Q92785 391 aa9.55□□□□□ -0.88
TOPBP1-202ENST00000503338 TCEANC2Q96MN5 208 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms