RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-203ENST00000503274 SEPT6Q14141 434 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 RSPO4Q2I0M5 234 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-203ENST00000503274 NKAPLQ5M9Q1 402 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 FAM20CQ8IXL6 584 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 RHOVQ96L33 236 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 ATXN3LQ9H3M9 355 aa9.63□□□□□ -0.87
NIPBL-203ENST00000503274 H2AFB1P0C5Y9 115 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 H2AFB2P0C5Z0 115 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 ERVK-24P63145 666 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 SGO2Q562F6 1265 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 PRR23CQ6ZRP0 262 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 JARID2Q92833 1246 aaPredicted RBP9.62□□□□□ -0.87
NIPBL-203ENST00000503274 KCNF1Q9H3M0 494 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 DISC1Q9NRI5 854 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 FAM105AQ9NUU6 356 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 RAXQ9Y2V3 346 aa9.62□□□□□ -0.87
NIPBL-203ENST00000503274 DCDC2CA8MYV0 355 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 E9PSI1 815 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 ITGB7P26010 798 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 MAP4P27816 1152 aaKnown RBP9.61□□□□□ -0.87
NIPBL-203ENST00000503274 RXRBP28702 533 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
NIPBL-203ENST00000503274 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-203ENST00000503274 CCDC84Q86UT8 332 aaPredicted RBP9.61□□□□□ -0.87
NIPBL-203ENST00000503274 YIPF2Q9BWQ6 316 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 CSADQ9Y600 493 aa9.61□□□□□ -0.87
NIPBL-203ENST00000503274 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
NIPBL-203ENST00000503274 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 INPP5AQ14642 412 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 BEND4Q6ZU67 534 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 HDXQ7Z353 690 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 CLEC10AQ8IUN9 316 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 FBLIM1Q8WUP2 373 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 SNCAIPQ9Y6H5 919 aa9.6□□□□□ -0.87
NIPBL-203ENST00000503274 RAB6AP20340 208 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 EIF4A3P38919 411 aaKnown RBP9.59□□□□□ -0.87
NIPBL-203ENST00000503274 SNAP47Q5SQN1 464 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 LRFN4Q6PJG9 635 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 BNC2Q6ZN30 1099 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-203ENST00000503274 USP48Q86UV5 1035 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 Q8N3U1 123 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 ACSS3Q9H6R3 686 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
NIPBL-203ENST00000503274 GARTP22102 1010 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
NIPBL-203ENST00000503274 TTLL4Q14679 1199 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 PPM1JQ5JR12 505 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 METTL16Q86W50 562 aaKnown RBP9.58□□□□□ -0.88
NIPBL-203ENST00000503274 GOLM1Q8NBJ4 401 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 EZH1Q92800 747 aaPredicted RBP9.58□□□□□ -0.88
NIPBL-203ENST00000503274 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 FAM83CQ9BQN1 747 aa9.58□□□□□ -0.88
NIPBL-203ENST00000503274 FAM95CA0A1B0GW59 222 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 DYRK3O43781 588 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 RNGTTO60942 597 aaKnown RBP9.57□□□□□ -0.88
NIPBL-203ENST00000503274 CDK8P49336 464 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 RPL6Q02878 288 aaKnown RBP9.57□□□□□ -0.88
NIPBL-203ENST00000503274 RING1Q06587 406 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 WIPI1Q5MNZ9 446 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-203ENST00000503274 C9orf131Q5VYM1 1079 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 GATAD2BQ8WXI9 593 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 C7orf69Q9H7B7 122 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
NIPBL-203ENST00000503274 HMX2A2RU54 273 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 FAM221AA4D161 298 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 CILPO75339 1184 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 F13A1P00488 732 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 NFICP08651 508 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 HCLS1P14317 486 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-203ENST00000503274 MAP7Q14244 749 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 NFKBIBQ15653 356 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 ZNF394Q53GI3 561 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 PAOXQ6QHF9 649 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 CYFIP1Q7L576 1253 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 ZNF296Q8WUU4 475 aaPredicted RBP9.56□□□□□ -0.88
NIPBL-203ENST00000503274 SEMA6CQ9H3T2 930 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 SEMA6BQ9H3T3 888 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 KCNQ5Q9NR82 932 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 ADAMTS1Q9UHI8 967 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 SUPT16HQ9Y5B9 1047 aaKnown RBP9.56□□□□□ -0.88
NIPBL-203ENST00000503274 PCDHGB7Q9Y5F8 929 aa9.56□□□□□ -0.88
NIPBL-203ENST00000503274 GFRA2O00451 464 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 FANCGO15287 622 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 BPNT1O95861 308 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 NEFMP07197 916 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 NT5DC4Q86YG4 428 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 SMYD4Q8IYR2 804 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-203ENST00000503274 DDX41Q9UJV9 622 aaKnown RBP9.55□□□□□ -0.88
NIPBL-203ENST00000503274 DAGLAQ9Y4D2 1042 aa9.55□□□□□ -0.88
NIPBL-203ENST00000503274 PRAMEF27A3QJZ7 478 aa9.54□□□□□ -0.88
NIPBL-203ENST00000503274 GREM1O60565 184 aa9.54□□□□□ -0.88
NIPBL-203ENST00000503274 TCF3P15923 654 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms