RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 G3BP1Q13283 466 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 CCDC152Q4G0S7 254 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 RRP12Q5JTH9 1297 aaKnown RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 CCDC174Q6PII3 467 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 MFN1Q8IWA4 741 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 WDR63Q8IWG1 891 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 ATP11CQ8NB49 1132 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 C3orf20Q8ND61 904 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 CTCFLQ8NI51 663 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 FAM81AQ8TBF8 368 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 SH3GL1Q99961 368 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 STK31Q9BXU1 1019 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 WDR70Q9NW82 654 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 TUBA8Q9NY65 449 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 ZMAT5Q9UDW3 170 aaKnown RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 MYO6Q9UM54 1294 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 FAN1Q9Y2M0 1017 aa7.47□□□□□ -1.21
CLCN3-203ENST00000502998 PHRF1Q9P1Y6 1649 aaKnown RBP7.47□□□□□ -1.21
CLCN3-203ENST00000502998 POLR3AO14802 1390 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-203ENST00000502998 SMTNL1A8MU46 457 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 FAM25EA8MYX2 175 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 EIF3CLB5ME19 914 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ERC2O15083 957 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 CEP104O60308 925 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 MAN1A1P33908 653 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 CLK1P49759 484 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 PSMD7P51665 324 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 CCNHP51946 323 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ZBED6P86452 979 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 TRIM29Q14134 588 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 CNGA3Q16281 694 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 AKNAD1Q5T1N1 836 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 GIMAP6Q6P9H5 292 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 PACS1Q6VY07 963 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ARMC9Q7Z3E5 817 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 PARP9Q8IXQ6 854 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ARL10Q8N8L6 244 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 PRPF38AQ8NAV1 312 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 GABPB2Q8TAK5 448 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 TSC1Q92574 1164 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 LRRCC1Q9C099 1032 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 DHX36Q9H2U1 1008 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 MMADHCQ9H3L0 296 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 BATF3Q9NR55 127 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 GINM1Q9NU53 330 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 RGL1Q9NZL6 768 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 LCMT1Q9UIC8 334 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ACAD8Q9UKU7 415 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 TMCC3Q9ULS5 477 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 DIS3Q9Y2L1 958 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.22
CLCN3-203ENST00000502998 ACEP12821 1306 aa7.46□□□□□ -1.22
CLCN3-203ENST00000502998 THSD7AQ9UPZ6 1657 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 RGPD1P0DJD0 1748 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 A0A0G2JS52 829 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 PLEKHG3A1L390 1219 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 PYGLP06737 847 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 HOXB1P14653 301 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-203ENST00000502998 SMARCA1P28370 1054 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 GCKP35557 465 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 RASSF7Q02833 373 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 LAMB3Q13751 1172 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 EIF4A2Q14240 407 aaKnown RBP7.45□□□□□ -1.22
CLCN3-203ENST00000502998 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-203ENST00000502998 TMEM110Q86TL2 294 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 RSPH3Q86UC2 560 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 ZNF280CQ8ND82 737 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 GOLGA1Q92805 767 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 SAAL1Q96ER3 474 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 NRDE2Q9H7Z3 1164 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 PRDM11Q9NQV5 511 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 SEL1LQ9UBV2 794 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 MAFFQ9ULX9 164 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLCN3-203ENST00000502998 SPATA31A5Q5VU36 1347 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 SPATA31A7Q8IWB4 1347 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 ROCK2O75116 1388 aaKnown RBP7.45□□□□□ -1.22
CLCN3-203ENST00000502998 KIAA0232Q92628 1395 aa7.45□□□□□ -1.22
CLCN3-203ENST00000502998 QRICH2Q9H0J4 1663 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 AHCYL1O43865 530 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 HIP1RO75146 1068 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 LMNB1P20700 586 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 ACTN2P35609 894 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 PRIM1P49642 420 aaKnown RBP7.44□□□□□ -1.22
CLCN3-203ENST00000502998 USP11P51784 963 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 SLC8A3P57103 927 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 MECOMQ03112 1051 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 MPP3Q13368 585 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 CHRNA2Q15822 529 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 KLHL40Q2TBA0 621 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 COBLL1Q53SF7 1204 aa7.44□□□□□ -1.22
CLCN3-203ENST00000502998 RCSD1Q6JBY9 416 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms