RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PRKAB2O43741 272 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
VCAN-204ENST00000502527 TIGD1Q96MW7 591 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 RNF41Q9H4P4 317 aaPredicted RBP19.18■□□□□ 0.66
VCAN-204ENST00000502527 WDHD1O75717 1129 aaPredicted RBP19.18■□□□□ 0.66
VCAN-204ENST00000502527 FMNL1O95466 1100 aaPredicted RBP19.18■□□□□ 0.66
VCAN-204ENST00000502527 IFNAR1P17181 557 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 CCDC144BQ3MJ40 725 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 MTERF4Q7Z6M4 381 aaKnown RBP19.18■□□□□ 0.66
VCAN-204ENST00000502527 SLC26A6Q9BXS9 759 aa19.18■□□□□ 0.66
VCAN-204ENST00000502527 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
VCAN-204ENST00000502527 MARCKSP29966 332 aaPredicted RBP19.17■□□□□ 0.66
VCAN-204ENST00000502527 CLEC4GQ6UXB4 293 aa19.17■□□□□ 0.66
VCAN-204ENST00000502527 TMTC2Q8N394 836 aa19.17■□□□□ 0.66
VCAN-204ENST00000502527 CACTINQ8WUQ7 758 aaKnown RBP19.17■□□□□ 0.66
VCAN-204ENST00000502527 TACC3Q9Y6A5 838 aa19.17■□□□□ 0.66
VCAN-204ENST00000502527 ERICH2A1L162 156 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 NLRP12P59046 1061 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 WTAPQ15007 396 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 PTPAQ15257 358 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 RRP12Q5JTH9 1297 aaKnown RBP19.16■□□□□ 0.66
VCAN-204ENST00000502527 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.16■□□□□ 0.66
VCAN-204ENST00000502527 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 GNL3LQ9NVN8 582 aaKnown RBP19.16■□□□□ 0.66
VCAN-204ENST00000502527 SPATA31A5Q5VU36 1347 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 SPATA31A7Q8IWB4 1347 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
VCAN-204ENST00000502527 SYKP43405 635 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 DPCR1Q3MIW9 517 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 FBXW7Q969H0 707 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 MAP3K14Q99558 947 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
VCAN-204ENST00000502527 CYP7A1P22680 504 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 RCAN1P53805 252 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 RTN1Q16799 776 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 MIGA1Q8NAN2 632 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.15■□□□□ 0.66
VCAN-204ENST00000502527 MROH7-TTC4A0A0A0MT08 1334 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 FAM237AA0A1B0GTK4 181 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 CCDC196A0A1B0GTZ2 297 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 TPM4P67936 248 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 SAFBQ15424 915 aaKnown RBP eCLIP19.15■□□□□ 0.66
VCAN-204ENST00000502527 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 LRRC8AQ8IWT6 810 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 HPSEQ9Y251 543 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 ZNF804BA4D1E1 1349 aa19.15■□□□□ 0.66
VCAN-204ENST00000502527 NRAPQ86VF7 1730 aa19.14■□□□□ 0.66
VCAN-204ENST00000502527 TAOK2Q9UL54 1235 aa19.14■□□□□ 0.65
VCAN-204ENST00000502527 LAMB2P55268 1798 aa19.14■□□□□ 0.65
VCAN-204ENST00000502527 BCL9LQ86UU0 1499 aa19.14■□□□□ 0.65
VCAN-204ENST00000502527 SMTNL1A8MU46 457 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 CUTAO60888 179 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 PPARAQ07869 468 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 UBE4AQ14139 1066 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 NOSTRINQ8IVI9 506 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 MAGEB6P1A0A0J9YX57 407 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 SF3B3Q15393 1217 aaKnown RBP19.13■□□□□ 0.65
VCAN-204ENST00000502527 RESP18Q5W5W9 173 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 SHC4Q6S5L8 630 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 ZKSCAN3Q9BRR0 538 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 RAI14Q9P0K7 980 aa19.13■□□□□ 0.65
VCAN-204ENST00000502527 BIN1O00499 593 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 MMP1P03956 469 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 ERFEQ4G0M1 354 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 UBAC1Q9BSL1 405 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 BSDC1Q9NW68 430 aaPredicted RBP19.12■□□□□ 0.65
VCAN-204ENST00000502527 ABCF2Q9UG63 623 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 ANAPC4Q9UJX5 808 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 IQSEC3Q9UPP2 1182 aaPredicted RBP19.12■□□□□ 0.65
VCAN-204ENST00000502527 DEXIO95424 95 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 GSDMDP57764 484 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 MYH14Q7Z406 1995 aaKnown RBP19.12■□□□□ 0.65
VCAN-204ENST00000502527 TUBE1Q9UJT0 475 aa19.12■□□□□ 0.65
VCAN-204ENST00000502527 GYG1P46976 350 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 FILIP1Q7Z7B0 1213 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
VCAN-204ENST00000502527 ESR2Q92731 530 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 FOXP1Q9H334 677 aaPredicted RBP19.11■□□□□ 0.65
VCAN-204ENST00000502527 IMPACTQ9P2X3 320 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 BCORQ6W2J9 1755 aa19.11■□□□□ 0.65
VCAN-204ENST00000502527 UBE2Q2LH0YL09 131 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 GUCY1A2P33402 732 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 PPP2R5BQ15173 497 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 ADGRA1Q86SQ6 560 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 NBPF11Q86T75 865 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 DIS3L2Q8IYB7 885 aaKnown RBP19.1■□□□□ 0.65
VCAN-204ENST00000502527 ZNF654Q8IZM8 581 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 KRI1Q8N9T8 703 aaKnown RBP19.1■□□□□ 0.65
VCAN-204ENST00000502527 FANCBQ8NB91 859 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 CHD4Q14839 1912 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 MINDY4BA8MYZ0 360 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 IKBKBO14920 756 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 KCNQ2O43526 872 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 SKILP12757 684 aa19.1■□□□□ 0.65
VCAN-204ENST00000502527 TPD52L1Q16890 204 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms