RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ZMYM5Q9UJ78 669 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 ZBTB21Q9ULJ3 1066 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 SUPT16HQ9Y5B9 1047 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 ABCB5Q2M3G0 1257 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 LVRNQ6Q4G3 990 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 TRIM22Q8IYM9 498 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 PI4K2BQ8TCG2 481 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 ANP32BQ92688 251 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 TRIM52Q96A61 297 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 USB1Q9BQ65 265 aaKnown RBP4.49□□□□□ -1.69
SUB1-202ENST00000502453 SEZ6LQ9BYH1 1024 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 PRDM11Q9NQV5 511 aa4.49□□□□□ -1.69
SUB1-202ENST00000502453 M0R2N6 131 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 MYBP10242 640 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 PWP1Q13610 501 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 CC2D1BQ5T0F9 858 aaKnown RBP4.48□□□□□ -1.69
SUB1-202ENST00000502453 NXNQ6DKJ4 435 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 NYAP1Q6ZVC0 841 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 SYNPOQ8N3V7 929 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 KIAA1958Q8N8K9 716 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 FLCNQ8NFG4 579 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 POF1BQ8WVV4 589 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 SAGE1Q9NXZ1 904 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 MAGED1Q9Y5V3 778 aaPredicted RBP4.48□□□□□ -1.69
SUB1-202ENST00000502453 RPN1P04843 607 aaKnown RBP4.48□□□□□ -1.69
SUB1-202ENST00000502453 CCND1P24385 295 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 SETD1BQ9UPS6 1966 aaKnown RBP4.48□□□□□ -1.69
SUB1-202ENST00000502453 FRMPD2Q68DX3 1309 aaPredicted RBP4.48□□□□□ -1.69
SUB1-202ENST00000502453 GSG1L2A8MUP6 293 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 ORC4O43929 436 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 PF4P02776 101 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 ADCY1Q08828 1119 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 TAF11Q15544 211 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 SAMD7Q7Z3H4 446 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 LRRTM3Q86VH5 581 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 OR8H2Q8N162 312 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 RCAN3Q9UKA8 241 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 AFG3L2Q9Y4W6 797 aa4.48□□□□□ -1.69
SUB1-202ENST00000502453 CENPJQ9HC77 1338 aaPredicted RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 GK5Q6ZS86 529 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.47□□□□□ -1.69
SUB1-202ENST00000502453 CNTD1Q8N815 330 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 NELL1Q92832 810 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 RETREG1Q9H6L5 497 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 DDX20Q9UHI6 824 aaKnown RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 DGKBQ9Y6T7 804 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 BICRAQ9NZM4 1560 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 PF4V1P10720 104 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 OAS2P29728 719 aaKnown RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 GDF10P55107 478 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 SLC9A9Q8IVB4 645 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 SLC10A4Q96EP9 437 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 RSRP1Q9BUV0 290 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 ZNF69Q9UC07 566 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 PHTF1Q9UMS5 762 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 GABRDO14764 452 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 ST18O60284 1047 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 PPFIA3O75145 1194 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 HSP90AB1P08238 724 aaKnown RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 BCAMP50895 628 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 CDC37Q16543 378 aaPredicted RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 PTPRNQ16849 979 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 MORN1Q5T089 497 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 DUSP27Q5VZP5 1158 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 RPAINQ86UA6 219 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 ARMC2Q8NEN0 867 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 CCDC47Q96A33 483 aaKnown RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 PGBD4Q96DM1 585 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 NOC4LQ9BVI4 516 aaKnown RBP4.47□□□□□ -1.69
SUB1-202ENST00000502453 NT5C1AQ9BXI3 368 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 AP1M1Q9BXS5 423 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 ZSWIM6Q9HCJ5 1215 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 CD248Q9HCU0 757 aa4.47□□□□□ -1.69
SUB1-202ENST00000502453 BACH1O14867 736 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 DGKGP49619 791 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 STAT4Q14765 748 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 ZKSCAN8Q15776 578 aaPredicted RBP4.46□□□□□ -1.69
SUB1-202ENST00000502453 TBC1D10BQ4KMP7 808 aaPredicted RBP4.46□□□□□ -1.69
SUB1-202ENST00000502453 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 TMEM67Q5HYA8 995 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 FAM180BQ6P0A1 224 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 NGEFQ8N5V2 710 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 FBXO27Q8NI29 283 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 ATP6V1E2Q96A05 226 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 CLIP3Q96DZ5 547 aa4.46□□□□□ -1.69
SUB1-202ENST00000502453 TNKSO95271 1327 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 RIMBP2O15034 1052 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 MBD4O95243 580 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 NEK4P51957 841 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 LMNB2Q03252 620 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 NDUFAF2Q8N183 169 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 LSM14AQ8ND56 463 aaKnown RBP4.46□□□□□ -1.7
SUB1-202ENST00000502453 RPGRQ92834 1020 aaKnown RBP4.46□□□□□ -1.7
SUB1-202ENST00000502453 PLD4Q96BZ4 506 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 AGBL1Q96MI9 1066 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 CXorf56Q9H5V9 222 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 ZNF232Q9UNY5 417 aa4.46□□□□□ -1.7
SUB1-202ENST00000502453 E2F8A0AVK6 867 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms