RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 NUCB1Q02818 461 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 NOGQ13253 232 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 MAP3K11Q16584 847 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 LDLRAD1Q5T700 205 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 CERS3Q8IU89 383 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 PI4K2BQ8TCG2 481 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 SLC10A4Q96EP9 437 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 RFX7Q2KHR2 1363 aa8.84□□□□□ -0.99
USP46-203ENST00000502443 MYH7P12883 1935 aa8.84□□□□□ -1
USP46-203ENST00000502443 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
USP46-203ENST00000502443 CDK5RAP2Q96SN8 1893 aa8.83□□□□□ -1
USP46-203ENST00000502443 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
USP46-203ENST00000502443 TCRBV5S4A2TA0A5A2 114 aa8.83□□□□□ -1
USP46-203ENST00000502443 DDTLA6NHG4 134 aaPredicted RBP8.83□□□□□ -1
USP46-203ENST00000502443 UNCXA6NJT0 531 aa8.83□□□□□ -1
USP46-203ENST00000502443 NPM3O75607 178 aaKnown RBP8.83□□□□□ -1
USP46-203ENST00000502443 SLC10A3P09131 477 aa8.83□□□□□ -1
USP46-203ENST00000502443 ADD2P35612 726 aa8.83□□□□□ -1
USP46-203ENST00000502443 MAP2K2P36507 400 aa8.83□□□□□ -1
USP46-203ENST00000502443 USP5P45974 858 aa8.83□□□□□ -1
USP46-203ENST00000502443 PDE1AP54750 535 aa8.83□□□□□ -1
USP46-203ENST00000502443 MAP3K9P80192 1104 aa8.83□□□□□ -1
USP46-203ENST00000502443 SLFNL1Q499Z3 407 aa8.83□□□□□ -1
USP46-203ENST00000502443 ZSCAN25Q6NSZ9 544 aa8.83□□□□□ -1
USP46-203ENST00000502443 SH3BP5LQ7L8J4 393 aa8.83□□□□□ -1
USP46-203ENST00000502443 RASAL3Q86YV0 1011 aa8.83□□□□□ -1
USP46-203ENST00000502443 MAPKAPK5Q8IW41 473 aa8.83□□□□□ -1
USP46-203ENST00000502443 ANKRD13AQ8IZ07 590 aa8.83□□□□□ -1
USP46-203ENST00000502443 KBTBD3Q8NAB2 608 aa8.83□□□□□ -1
USP46-203ENST00000502443 CLMNQ96JQ2 1002 aa8.83□□□□□ -1
USP46-203ENST00000502443 WRNIP1Q96S55 665 aa8.83□□□□□ -1
USP46-203ENST00000502443 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
USP46-203ENST00000502443 STAP2Q9UGK3 403 aa8.83□□□□□ -1
USP46-203ENST00000502443 FOCADQ5VW36 1801 aa8.82□□□□□ -1
USP46-203ENST00000502443 MAP2K1Q02750 393 aaPredicted RBP8.82□□□□□ -1
USP46-203ENST00000502443 MKRN3Q13064 507 aaKnown RBP8.82□□□□□ -1
USP46-203ENST00000502443 VGLL4Q14135 290 aa8.82□□□□□ -1
USP46-203ENST00000502443 UBE3CQ15386 1083 aa8.82□□□□□ -1
USP46-203ENST00000502443 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
USP46-203ENST00000502443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.82□□□□□ -1
USP46-203ENST00000502443 ZKSCAN4Q969J2 545 aaPredicted RBP8.82□□□□□ -1
USP46-203ENST00000502443 ZIC5Q96T25 663 aa8.82□□□□□ -1
USP46-203ENST00000502443 RIOK1Q9BRS2 568 aaKnown RBP8.82□□□□□ -1
USP46-203ENST00000502443 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
USP46-203ENST00000502443 ZNF341Q9BYN7 854 aa8.82□□□□□ -1
USP46-203ENST00000502443 ELP3Q9H9T3 547 aa8.82□□□□□ -1
USP46-203ENST00000502443 CSADQ9Y600 493 aa8.82□□□□□ -1
USP46-203ENST00000502443 PCNTO95613 3336 aa8.82□□□□□ -1
USP46-203ENST00000502443 OTOFQ9HC10 1997 aa8.82□□□□□ -1
USP46-203ENST00000502443 ATRNL1Q5VV63 1379 aa8.82□□□□□ -1
USP46-203ENST00000502443 FLT1P17948 1338 aa8.81□□□□□ -1
USP46-203ENST00000502443 CHGBP05060 677 aa8.81□□□□□ -1
USP46-203ENST00000502443 NEFLP07196 543 aa8.81□□□□□ -1
USP46-203ENST00000502443 ZFYP08048 801 aaPredicted RBP8.81□□□□□ -1
USP46-203ENST00000502443 HSPA1AP0DMV8 641 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 HSPA1BP0DMV9 641 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 KIF23Q02241 960 aaPredicted RBP8.81□□□□□ -1
USP46-203ENST00000502443 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 SPRYD7Q5W111 196 aa8.81□□□□□ -1
USP46-203ENST00000502443 PLEKHM2Q8IWE5 1019 aa8.81□□□□□ -1
USP46-203ENST00000502443 LCORLQ8N3X6 602 aa8.81□□□□□ -1
USP46-203ENST00000502443 AIDAQ96BJ3 306 aa8.81□□□□□ -1
USP46-203ENST00000502443 OPTNQ96CV9 577 aa8.81□□□□□ -1
USP46-203ENST00000502443 FSD1Q9BTV5 496 aa8.81□□□□□ -1
USP46-203ENST00000502443 CRNKL1Q9BZJ0 848 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 DHX36Q9H2U1 1008 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 ARMT1Q9H993 441 aa8.81□□□□□ -1
USP46-203ENST00000502443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.81□□□□□ -1
USP46-203ENST00000502443 PI4KBQ9UBF8 816 aa8.81□□□□□ -1
USP46-203ENST00000502443 SAP30BPQ9UHR5 308 aaKnown RBP8.81□□□□□ -1
USP46-203ENST00000502443 PALD1Q9ULE6 856 aa8.81□□□□□ -1
USP46-203ENST00000502443 MYH1P12882 1939 aa8.81□□□□□ -1
USP46-203ENST00000502443 THSD7BQ9C0I4 1608 aa8.8□□□□□ -1
USP46-203ENST00000502443 FAM196BA6NMK8 535 aa8.8□□□□□ -1
USP46-203ENST00000502443 RNF113AO15541 343 aaKnown RBP8.8□□□□□ -1
USP46-203ENST00000502443 MBD4O95243 580 aa8.8□□□□□ -1
USP46-203ENST00000502443 SLURP2P0DP57 97 aa8.8□□□□□ -1
USP46-203ENST00000502443 ZBTB48P10074 688 aaPredicted RBP8.8□□□□□ -1
USP46-203ENST00000502443 INPP5BP32019 993 aa8.8□□□□□ -1
USP46-203ENST00000502443 MAP3K10Q02779 954 aa8.8□□□□□ -1
USP46-203ENST00000502443 SLC4A8Q2Y0W8 1093 aa8.8□□□□□ -1
USP46-203ENST00000502443 EVI5LQ96CN4 794 aa8.8□□□□□ -1
USP46-203ENST00000502443 WNK4Q96J92 1243 aa8.8□□□□□ -1
USP46-203ENST00000502443 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
USP46-203ENST00000502443 PUS7LQ9H0K6 701 aaKnown RBP8.8□□□□□ -1
USP46-203ENST00000502443 WBP1LQ9NX94 342 aa8.8□□□□□ -1
USP46-203ENST00000502443 ZNF112Q9UJU3 913 aa8.8□□□□□ -1
USP46-203ENST00000502443 SNCAIPQ9Y6H5 919 aa8.8□□□□□ -1
USP46-203ENST00000502443 COL2A1P02458 1487 aaPredicted RBP8.8□□□□□ -1
USP46-203ENST00000502443 PHF20L1A8MW92 1017 aa8.79□□□□□ -1
USP46-203ENST00000502443 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
USP46-203ENST00000502443 PRKAB2O43741 272 aa8.79□□□□□ -1
USP46-203ENST00000502443 TBC1D12O60347 775 aa8.79□□□□□ -1
USP46-203ENST00000502443 POLR3DP05423 398 aaPredicted RBP8.79□□□□□ -1
USP46-203ENST00000502443 HLA-DOAP06340 250 aa8.79□□□□□ -1
USP46-203ENST00000502443 GJA5P36382 358 aa8.79□□□□□ -1
USP46-203ENST00000502443 FOXP4Q8IVH2 680 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms