RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TRIM28Q13263 835 aaKnown RBP5.54□□□□□ -1.52
MATR3-202ENST00000502422 TAF1CQ15572 869 aaPredicted RBP5.54□□□□□ -1.52
MATR3-202ENST00000502422 MAP3K11Q16584 847 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 PROX2Q3B8N5 592 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 SMAP1Q8IYB5 467 aaPredicted RBP5.54□□□□□ -1.52
MATR3-202ENST00000502422 KCNK17Q96T54 332 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 IGSF5Q9NSI5 407 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 FAM217BQ9NTX9 383 aaPredicted RBP5.54□□□□□ -1.52
MATR3-202ENST00000502422 TRIOBPQ9H2D6 2365 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 MED23Q9ULK4 1368 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 PLIN1O60240 522 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 GTF2IP78347 998 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 KRT24Q2M2I5 525 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 CCDC191Q8NCU4 936 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 MYD88Q99836 296 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 HTATIP2Q9BUP3 242 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 IRX2Q9BZI1 471 aaPredicted RBP5.54□□□□□ -1.52
MATR3-202ENST00000502422 VEZTQ9HBM0 779 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 PPP2R3BQ9Y5P8 575 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 NR2E3Q9Y5X4 410 aa5.54□□□□□ -1.52
MATR3-202ENST00000502422 COL4A1P02462 1669 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 COL1A1P02452 1464 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 WTIPA6NIX2 430 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 TRIM6-TRIM34B2RNG4 842 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 KCNJ4P48050 445 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 PSEN2P49810 448 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 RBM5P52756 815 aaKnown RBP eCLIP5.53□□□□□ -1.52
MATR3-202ENST00000502422 FAM109BQ6ICB4 259 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 KIAA1211Q6ZU35 1233 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 NUDT18Q6ZVK8 323 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 NKX2-3Q8TAU0 364 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 SH3TC2Q8TF17 1288 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 JARID2Q92833 1246 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 OPTNQ96CV9 577 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 PTPN18Q99952 460 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 BSDC1Q9NW68 430 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 CWC25Q9NXE8 425 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 MINPP1Q9UNW1 487 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 CEP290O15078 2479 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 CLRN2A0PK11 232 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 F8W031 263 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 PCCAP05165 728 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 IGHMBP2P38935 993 aaKnown RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 MRE11P49959 708 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 VARS2Q5ST30 1063 aaKnown RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 NBPF12Q5TAG4 269 aaPredicted RBP5.53□□□□□ -1.52
MATR3-202ENST00000502422 ELP3Q9H9T3 547 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 HCSTQ9UBK5 93 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 LEMD3Q9Y2U8 911 aa5.53□□□□□ -1.52
MATR3-202ENST00000502422 CCL15-CCL14A0A0B4J2E2 113 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 RCCD1A6NED2 376 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 USP2O75604 605 aaPredicted RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 DDX58O95786 925 aaKnown RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 GNRH1P01148 92 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 HOXB7P09629 217 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 TMPOP42166 694 aaKnown RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 RBM25P49756 843 aaKnown RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 GTF2A2P52657 109 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 FOXK2Q01167 660 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 CCL15Q16663 113 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 C20orf194Q5TEA3 1177 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 TATDN2Q93075 761 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 MPHOSPH8Q99549 860 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 BIN2Q9UBW5 565 aaPredicted RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 NAP1L2Q9ULW6 460 aaPredicted RBP5.52□□□□□ -1.53
MATR3-202ENST00000502422 ZNF804BA4D1E1 1349 aa5.52□□□□□ -1.53
MATR3-202ENST00000502422 SMAPO00193 183 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CHL1O00533 1208 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 HOXD10P28358 340 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 GJA5P36382 358 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 PRMT2P55345 433 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CAP1Q01518 475 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 TNFAIP1Q13829 316 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 RASA3Q14644 834 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CFAP100Q494V2 611 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 UTP14CQ5TAP6 766 aaKnown RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 CENPQQ7L2Z9 268 aaPredicted RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 TXNRD3Q86VQ6 643 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 ZBED2Q9BTP6 218 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 ANKRD2Q9GZV1 360 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 PHAXQ9H814 394 aaKnown RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 ZHX1Q9UKY1 873 aaPredicted RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 PNMA3Q9UL41 463 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CSADQ9Y600 493 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 APBB1O00213 710 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 TLR2O60603 784 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 OFD1O75665 1012 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 TERF1P54274 439 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CTSWP56202 376 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 DUSP27Q5VZP5 1158 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 MTMR14Q8NCE2 650 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 TTLL11Q8NHH1 800 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 RAET1EQ8TD07 263 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 ZBED3Q96IU2 234 aaPredicted RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 PRMT6Q96LA8 375 aaPredicted RBP5.51□□□□□ -1.53
MATR3-202ENST00000502422 GREM2Q9H772 168 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 GRPEL1Q9HAV7 217 aa5.51□□□□□ -1.53
MATR3-202ENST00000502422 CD209Q9NNX6 404 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms