RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 TOMM22Q9NS69 142 aa9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 ZNF219Q9P2Y4 722 aaPredicted RBP9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 TTF2Q9UNY4 1162 aaKnown RBP9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 CCDC88AQ3V6T2 1871 aa9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
SPIRE1-211ENST00000498803 SNED1Q8TER0 1413 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 MYO5AQ9Y4I1 1855 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 SLX4Q8IY92 1834 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 SH2B2O14492 632 aaPredicted RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 IFIT3O14879 490 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 KDM4AO75164 1064 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 CDKL5O76039 1030 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 PDIA3P30101 505 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 TMEM67Q5HYA8 995 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 DACT2Q5SW24 774 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 SGMS1Q86VZ5 419 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 TEX11Q8IYF3 940 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 RGS22Q8NE09 1264 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 MKRN1Q9UHC7 482 aaKnown RBP9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
SPIRE1-211ENST00000498803 KIF13BQ9NQT8 1826 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 TIAM2Q8IVF5 1701 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 NEDD4P46934 1319 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 KLF18A0A0U1RQI7 1052 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 CCDC196A0A1B0GTZ2 297 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 CCDC69A6NI79 296 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 GOLGA8BA8MQT2 603 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 B4E1Z4 1266 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 CPLX1O14810 134 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 BRD1O95696 1058 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 POLR3DP05423 398 aaPredicted RBP9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 GJB2P29033 226 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 MCM4P33991 863 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 ANTXR2P58335 489 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 APOBRQ0VD83 1088 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 GRIK5Q16478 980 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 AOC3Q16853 763 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 C12orf60Q5U649 245 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 NFXL1Q6ZNB6 911 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 TTC6Q86TZ1 520 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 NECAB1Q8N987 351 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 FAM184AQ8NB25 1140 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 IGDCC4Q8TDY8 1250 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 ZDHHC15Q96MV8 337 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 LRRC2Q9BYS8 371 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 DBNDD1Q9H9R9 158 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 ZSWIM5Q9P217 1185 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 NAP1L2Q9ULW6 460 aaPredicted RBP9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 DAGLAQ9Y4D2 1042 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 LAMA4Q16363 1823 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
SPIRE1-211ENST00000498803 ROBO3Q96MS0 1386 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 STX6O43752 255 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 NPM3O75607 178 aaKnown RBP9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 LARGE1O95461 756 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 RHBDL3P58872 404 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 SCRN1Q12765 414 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 STK3Q13188 491 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 WTAPQ15007 396 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 CHST3Q7LGC8 479 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 NIM1KQ8IY84 436 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 CERS5Q8N5B7 392 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 SMARCC2Q8TAQ2 1214 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 TGFBRAP1Q8WUH2 860 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 SGIP1Q9BQI5 828 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 LARP6Q9BRS8 491 aaKnown RBP9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 TAOK3Q9H2K8 898 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 ZNRF3Q9ULT6 936 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
SPIRE1-211ENST00000498803 LTBP3Q9NS15 1303 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 ZBTB43O43298 467 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 CALM1P0DP23 149 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 CALM2P0DP24 149 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 CALM3P0DP25 149 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 SYT1P21579 422 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 IARSP41252 1262 aaKnown RBP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 CRKP46108 304 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 METAP2P50579 478 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 NBR1Q14596 966 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 SKOR2Q2VWA4 1001 aaPredicted RBP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 PPP4R3BQ5MIZ7 849 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 APOA5Q6Q788 366 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 ZNF444Q8N0Y2 327 aaPredicted RBP9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 OGFOD1Q8N543 542 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 JDP2Q8WYK2 163 aa9.89□□□□□ -0.83
SPIRE1-211ENST00000498803 ZSCAN10Q96SZ4 725 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms