RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 NBPF15Q8N660 670 aa4.72□□□□□ -1.65
CLTC-209ENST00000498711 NGLY1Q96IV0 654 aa4.72□□□□□ -1.65
CLTC-209ENST00000498711 COG3Q96JB2 828 aa4.72□□□□□ -1.65
CLTC-209ENST00000498711 RAB6BQ9NRW1 208 aa4.72□□□□□ -1.65
CLTC-209ENST00000498711 USP6P35125 1406 aa4.72□□□□□ -1.65
CLTC-209ENST00000498711 QSER1Q2KHR3 1735 aa4.71□□□□□ -1.65
CLTC-209ENST00000498711 FAM83GA6ND36 823 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 PDGFAP04085 211 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 CHMLP26374 656 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 GTF2F1P35269 517 aaKnown RBP eCLIP4.71□□□□□ -1.66
CLTC-209ENST00000498711 GRM5P41594 1212 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 PIP4K2BP78356 416 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 DNM1Q05193 864 aaKnown RBP4.71□□□□□ -1.66
CLTC-209ENST00000498711 SAFB2Q14151 953 aaKnown RBP eCLIP4.71□□□□□ -1.66
CLTC-209ENST00000498711 GLIPR1L2Q4G1C9 344 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 CASC1Q6TDU7 716 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 KIAA1211Q6ZU35 1233 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 NOP9Q86U38 636 aaKnown RBP4.71□□□□□ -1.66
CLTC-209ENST00000498711 CCDC116Q8IYX3 515 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 TMX3Q96JJ7 454 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 FRMD6Q96NE9 622 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 SRCIN1Q9C0H9 1055 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 ARHGEF10LQ9HCE6 1279 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.71□□□□□ -1.66
CLTC-209ENST00000498711 COL18A1P39060 1754 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 PIK3C2AO00443 1686 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 SERTM1A2A2V5 107 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 HMMRO75330 724 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 TLR1Q15399 786 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 IFFO2Q5TF58 517 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 ETFBKMTQ8IXQ9 262 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 EDEM1Q92611 657 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 TTC14Q96N46 770 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 CSRNP1Q96S65 589 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 MEIS3Q99687 375 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 FUCA2Q9BTY2 467 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 CCDC39Q9UFE4 941 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 NSFL1CQ9UNZ2 370 aaKnown RBP4.71□□□□□ -1.66
CLTC-209ENST00000498711 IQSEC3Q9UPP2 1182 aaPredicted RBP4.71□□□□□ -1.66
CLTC-209ENST00000498711 AK5Q9Y6K8 562 aa4.71□□□□□ -1.66
CLTC-209ENST00000498711 DYNC1I1O14576 645 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 RGS20O76081 388 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 HSPA4P34932 840 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 ZAP70P43403 619 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 RTN1Q16799 776 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 C11orf91Q3C1V1 193 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 PPP1R26Q5T8A7 1209 aaPredicted RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 MTERF4Q7Z6M4 381 aaKnown RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 DHX38Q92620 1227 aaKnown RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 XAGE2Q96GT9 111 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 GMLQ99445 158 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 CFHR5Q9BXR6 569 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 SPTLC3Q9NUV7 552 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 IGSF1Q8N6C5 1336 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 TTC21AQ8NDW8 1320 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 EML1O00423 815 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 PPEF1O14829 653 aaPredicted RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 IL2RAP01589 272 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 PCSK2P16519 638 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 DGKZQ13574 1117 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 CAVIN1Q6NZI2 390 aaKnown RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.7□□□□□ -1.66
CLTC-209ENST00000498711 MPNDQ8N594 471 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 SSH3Q8TE77 659 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 RGS17Q9UGC6 210 aaPredicted RBP4.7□□□□□ -1.66
CLTC-209ENST00000498711 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 USP3Q9Y6I4 520 aa4.7□□□□□ -1.66
CLTC-209ENST00000498711 BCL9LQ86UU0 1499 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 RAB11FIP3O75154 756 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 LETM1O95202 739 aaPredicted RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 ADH1CP00326 375 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 TNNI2P48788 182 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 RBM6P78332 1123 aaKnown RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 TEAD4Q15561 434 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 KRT24Q2M2I5 525 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ALDH16A1Q8IZ83 802 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 RNF166Q96A37 237 aaPredicted RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 ALDH8A1Q9H2A2 487 aaPredicted RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 ZNF232Q9UNY5 417 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 TLL2Q9Y6L7 1015 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 KDM3BQ7LBC6 1761 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 GNAI2P04899 355 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 DCTN1Q14203 1278 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 SASS6Q6UVJ0 657 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 G2E3Q7L622 706 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 FAM184AQ8NB25 1140 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 CNKSR1Q969H4 720 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 PRDM4Q9UKN5 801 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 TRPC5Q9UL62 973 aaPredicted RBP4.69□□□□□ -1.66
CLTC-209ENST00000498711 INPP5FQ9Y2H2 1132 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 NCAPD2Q15021 1401 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 NFAT5O94916 1531 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 GNAI3P08754 354 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 CTSHP09668 335 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 NOS2P35228 1153 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 PTPN5P54829 565 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 NR5A1Q13285 461 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 ORC1Q13415 861 aa4.69□□□□□ -1.66
CLTC-209ENST00000498711 RRS1Q15050 365 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms