RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 COL4A1P02462 1669 aa23.69■■□□□ 1.38
ACTN4-208ENST00000497637 FGFR2P21802 821 aa23.68■■□□□ 1.38
ACTN4-208ENST00000497637 IREB2P48200 963 aaKnown RBP23.68■■□□□ 1.38
ACTN4-208ENST00000497637 FBXW7Q969H0 707 aa23.68■■□□□ 1.38
ACTN4-208ENST00000497637 PAG1Q9NWQ8 432 aa23.68■■□□□ 1.38
ACTN4-208ENST00000497637 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.68■■□□□ 1.38
ACTN4-208ENST00000497637 A0A1W2PPC1 479 aa23.67■■□□□ 1.38
ACTN4-208ENST00000497637 PUM3Q15397 648 aaKnown RBP23.67■■□□□ 1.38
ACTN4-208ENST00000497637 LPIN2Q92539 896 aa23.67■■□□□ 1.38
ACTN4-208ENST00000497637 ZBED3Q96IU2 234 aaPredicted RBP23.67■■□□□ 1.38
ACTN4-208ENST00000497637 FAM227BQ96M60 508 aa23.67■■□□□ 1.38
ACTN4-208ENST00000497637 PTPN18Q99952 460 aa23.67■■□□□ 1.38
ACTN4-208ENST00000497637 MXD3Q9BW11 206 aa23.67■■□□□ 1.38
ACTN4-208ENST00000497637 KCNB2Q92953 911 aa23.66■■□□□ 1.38
ACTN4-208ENST00000497637 HTATIP2Q9BUP3 242 aa23.66■■□□□ 1.38
ACTN4-208ENST00000497637 PRO3102Q9H379 93 aa23.66■■□□□ 1.38
ACTN4-208ENST00000497637 ZFYVE28Q9HCC9 887 aa23.66■■□□□ 1.38
ACTN4-208ENST00000497637 NR2E3Q9Y5X4 410 aa23.66■■□□□ 1.38
ACTN4-208ENST00000497637 A0A0D9SFI3 127 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 K7ELQ4 463 aaPredicted RBP23.65■■□□□ 1.38
ACTN4-208ENST00000497637 GOLIM4O00461 696 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 WDHD1O75717 1129 aaPredicted RBP23.65■■□□□ 1.38
ACTN4-208ENST00000497637 CAP1Q01518 475 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 TTLL5Q6EMB2 1281 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 NKX2-3Q8TAU0 364 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 PALD1Q9ULE6 856 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 FZD1Q9UP38 647 aa23.65■■□□□ 1.38
ACTN4-208ENST00000497637 CCDC171Q6TFL3 1326 aa23.64■■□□□ 1.38
ACTN4-208ENST00000497637 ST18O60284 1047 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.37
ACTN4-208ENST00000497637 GNRH1P01148 92 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 SLC5A1P13866 664 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 PTH1RQ03431 593 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 ANTXR1Q9H6X2 564 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 NDUFB9Q9Y6M9 179 aa23.64■■□□□ 1.37
ACTN4-208ENST00000497637 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
ACTN4-208ENST00000497637 UQCRFS1P1P0C7P4 283 aa23.63■■□□□ 1.37
ACTN4-208ENST00000497637 KIF22Q14807 665 aa23.63■■□□□ 1.37
ACTN4-208ENST00000497637 DLGAP5Q15398 846 aa23.63■■□□□ 1.37
ACTN4-208ENST00000497637 KIAA0825Q8IV33 1275 aa23.63■■□□□ 1.37
ACTN4-208ENST00000497637 MAP4K1Q92918 833 aa23.63■■□□□ 1.37
ACTN4-208ENST00000497637 SPEF2Q9C093 1822 aa23.62■■□□□ 1.37
ACTN4-208ENST00000497637 MYO1BO43795 1136 aa23.62■■□□□ 1.37
ACTN4-208ENST00000497637 PRMT2P55345 433 aa23.62■■□□□ 1.37
ACTN4-208ENST00000497637 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
ACTN4-208ENST00000497637 HELBQ8NG08 1087 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-208ENST00000497637 HELLSQ9NRZ9 838 aa23.62■■□□□ 1.37
ACTN4-208ENST00000497637 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
ACTN4-208ENST00000497637 WTIPA6NIX2 430 aaPredicted RBP23.61■■□□□ 1.37
ACTN4-208ENST00000497637 GJA5P36382 358 aa23.61■■□□□ 1.37
ACTN4-208ENST00000497637 TAF1CQ15572 869 aaPredicted RBP23.61■■□□□ 1.37
ACTN4-208ENST00000497637 MCMDC2Q4G0Z9 681 aa23.61■■□□□ 1.37
ACTN4-208ENST00000497637 ZMYM1Q5SVZ6 1142 aa23.61■■□□□ 1.37
ACTN4-208ENST00000497637 MTMR14Q8NCE2 650 aa23.61■■□□□ 1.37
ACTN4-208ENST00000497637 RNF113AO15541 343 aaKnown RBP23.6■■□□□ 1.37
ACTN4-208ENST00000497637 ARID4AP29374 1257 aaPredicted RBP23.6■■□□□ 1.37
ACTN4-208ENST00000497637 CHRNDQ07001 517 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 NECTIN1Q15223 517 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 SH3TC2Q8TF17 1288 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 MINPP1Q9UNW1 487 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 SNX14Q9Y5W7 946 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 LAMB1P07942 1786 aa23.6■■□□□ 1.37
ACTN4-208ENST00000497637 ZNF804BA4D1E1 1349 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 TAF5LO75529 589 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 MCM2P49736 904 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 CCDC102BQ68D86 513 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 MS4A4AQ96JQ5 239 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 LEMD3Q9Y2U8 911 aa23.59■■□□□ 1.37
ACTN4-208ENST00000497637 RBM8AQ9Y5S9 174 aaKnown RBP23.59■■□□□ 1.37
ACTN4-208ENST00000497637 USP2O75604 605 aaPredicted RBP23.58■■□□□ 1.37
ACTN4-208ENST00000497637 ZFYP08048 801 aaPredicted RBP23.58■■□□□ 1.37
ACTN4-208ENST00000497637 ZAP70P43403 619 aa23.58■■□□□ 1.37
ACTN4-208ENST00000497637 NEK4P51957 841 aa23.58■■□□□ 1.37
ACTN4-208ENST00000497637 GTF2A2P52657 109 aa23.58■■□□□ 1.37
ACTN4-208ENST00000497637 OPTNQ96CV9 577 aa23.58■■□□□ 1.37
ACTN4-208ENST00000497637 MCAMP43121 646 aa23.57■■□□□ 1.36
ACTN4-208ENST00000497637 PHKA1P46020 1223 aa23.57■■□□□ 1.36
ACTN4-208ENST00000497637 ZNF589Q86UQ0 364 aaPredicted RBP23.57■■□□□ 1.36
ACTN4-208ENST00000497637 RASEFQ8IZ41 740 aa23.57■■□□□ 1.36
ACTN4-208ENST00000497637 SLKQ9H2G2 1235 aaPredicted RBP23.57■■□□□ 1.36
ACTN4-208ENST00000497637 SSC5DA1L4H1 1573 aa23.57■■□□□ 1.36
ACTN4-208ENST00000497637 LAMA3Q16787 3333 aa23.56■■□□□ 1.36
ACTN4-208ENST00000497637 UBE4AQ14139 1066 aa23.56■■□□□ 1.36
ACTN4-208ENST00000497637 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
ACTN4-208ENST00000497637 TM6SF1Q9BZW5 370 aa23.56■■□□□ 1.36
ACTN4-208ENST00000497637 DDIT3P35638 169 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 GTF2IP78347 998 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 LACTBP83111 547 aaPredicted RBP23.55■■□□□ 1.36
ACTN4-208ENST00000497637 NBPF12Q5TAG4 269 aaPredicted RBP23.55■■□□□ 1.36
ACTN4-208ENST00000497637 CREB3L3Q68CJ9 461 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 GPR153Q6NV75 609 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 UBE2Q1Q7Z7E8 422 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 BRI3BPQ8WY22 251 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 SHISA4Q96DD7 197 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 CHMP5Q9NZZ3 219 aa23.55■■□□□ 1.36
ACTN4-208ENST00000497637 CCL15-CCL14A0A0B4J2E2 113 aa23.54■■□□□ 1.36
ACTN4-208ENST00000497637 KCNJ4P48050 445 aa23.54■■□□□ 1.36
ACTN4-208ENST00000497637 CCL15Q16663 113 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms