RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LDHDQ86WU2 507 aa23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 AMOTL1Q8IY63 956 aa23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 HOOK2Q96ED9 719 aa23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 OSBPL5Q9H0X9 879 aaPredicted RBP23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 FAM198AQ9UFP1 575 aa23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 FGAP02671 866 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 TTC6Q86TZ1 520 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 DCPSQ96C86 337 aaKnown RBP23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 NAPBQ9H115 298 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 RRAGCQ9HB90 399 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 ANO2Q9NQ90 1003 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 ANAPC4Q9UJX5 808 aa23.56■■□□□ 1.36
SCAMP3-209ENST00000497470 PRKAB2O43741 272 aa23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 VPS53Q5VIR6 699 aa23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 METTL16Q86W50 562 aaKnown RBP23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 USP26Q9BXU7 913 aa23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 EHD4Q9H223 541 aa23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 CDK5RAP2Q96SN8 1893 aa23.55■■□□□ 1.36
SCAMP3-209ENST00000497470 APPP05067 770 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 MAP3K10Q02779 954 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 NFIAQ12857 509 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 NECTIN1Q15223 517 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 TSGA10IPQ3SY00 556 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 ANGEL2Q5VTE6 544 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 FOXP4Q8IVH2 680 aaPredicted RBP23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 IL27Q8NEV9 243 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 SDR42E1Q8WUS8 393 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 KCNB2Q92953 911 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 EPB41L4AQ9HCS5 686 aaPredicted RBP23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 DDX4Q9NQI0 724 aaKnown RBP23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 GGA3Q9NZ52 723 aa23.54■■□□□ 1.36
SCAMP3-209ENST00000497470 CNTNAP1P78357 1384 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 TBC1D12O60347 775 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 PTH1RQ03431 593 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 C12orf60Q5U649 245 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 CDC37L1Q7L3B6 337 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 IL17RAQ96F46 866 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 GPBP1L1Q9HC44 474 aaPredicted RBP23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 PI4KBQ9UBF8 816 aa23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 DDX60LQ5H9U9 1706 aaKnown RBP23.53■■□□□ 1.36
SCAMP3-209ENST00000497470 ROBO3Q96MS0 1386 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 CLRN2A0PK11 232 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 TDO2P48775 406 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 CTR9Q6PD62 1173 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 MAPKAPK5Q8IW41 473 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 SULF1Q8IWU6 871 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 DEFB129Q9H1M3 183 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 UPF2Q9HAU5 1272 aaKnown RBP23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 NMRK2Q9NPI5 230 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
SCAMP3-209ENST00000497470 USP17L12C9JPN9 530 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 USP17L21D6R901 530 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 HLA-DOAP06340 250 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 FGRP09769 529 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 RASA3Q14644 834 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 IMMTQ16891 758 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 VEZTQ9HBM0 779 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 ZNF287Q9HBT7 754 aa23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 HERC5Q9UII4 1024 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
SCAMP3-209ENST00000497470 SLC3A2P08195 630 aaKnown RBP23.5■■□□□ 1.35
SCAMP3-209ENST00000497470 HSPA4P34932 840 aa23.5■■□□□ 1.35
SCAMP3-209ENST00000497470 ANAPC15P60006 121 aa23.5■■□□□ 1.35
SCAMP3-209ENST00000497470 TEPSINQ96N21 525 aa23.5■■□□□ 1.35
SCAMP3-209ENST00000497470 TCP10L2B9ZVM9 353 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 ZNF213O14771 459 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 MCCP23508 829 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 GABPAQ06546 454 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 SUPT20HL1Q3ZLR7 823 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 SWAP70Q9UH65 585 aa23.49■■□□□ 1.35
SCAMP3-209ENST00000497470 NAV1Q8NEY1 1877 aa23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 POLR3DP05423 398 aaPredicted RBP23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 YY1P25490 414 aa23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 PICALMQ13492 652 aa23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 EAPPQ56P03 285 aaPredicted RBP23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 KRT26Q7Z3Y9 468 aa23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 RNF41Q9H4P4 317 aaPredicted RBP23.48■■□□□ 1.35
SCAMP3-209ENST00000497470 MYH1P12882 1939 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 ZKSCAN1P17029 563 aaPredicted RBP23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 CACNB3P54284 484 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 PPARAQ07869 468 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 KRT32Q14532 448 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 SH3BP5LQ7L8J4 393 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 SERPINB13Q9UIV8 391 aa23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 ASTN2O75129 1339 aaPredicted RBP23.47■■□□□ 1.35
SCAMP3-209ENST00000497470 DDTLA6NHG4 134 aaPredicted RBP23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 RBM25P49756 843 aaKnown RBP23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 TCP10Q12799 353 aa23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 C16orf86Q6ZW13 317 aa23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 STAG1Q8WVM7 1258 aa23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 PALD1Q9ULE6 856 aa23.46■■□□□ 1.35
SCAMP3-209ENST00000497470 UNCXA6NJT0 531 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 KIF3CO14782 793 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 SEC24BO95487 1268 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 CYP21A2P08686 494 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 PDE4BQ07343 736 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 DCAF15Q66K64 600 aa23.45■■□□□ 1.34
SCAMP3-209ENST00000497470 CREB3L3Q68CJ9 461 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms