RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 ETFBP38117 255 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 KIF4BQ2VIQ3 1234 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 SCARA3Q6AZY7 606 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 DPH6Q7L8W6 267 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 FBXO11Q86XK2 927 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 CPLX3Q8WVH0 158 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 SHDQ96IW2 340 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 FERD3LQ96RJ6 166 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 PLVAPQ9BX97 442 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 SRRTQ9BXP5 876 aaKnown RBP6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 STRIP2Q9ULQ0 834 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 PCDHGC5Q9Y5F6 944 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 CSADQ9Y600 493 aa6.3□□□□□ -1.4
GTF2E1-205ENST00000497393 GFRA2O00451 464 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 RAC1P63000 192 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 FBXW10Q5XX13 1052 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 FAM169BQ8N8A8 192 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 ENAMQ9NRM1 1142 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 ZNRF3Q9ULT6 936 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 PCDHB14Q9Y5E9 798 aa6.29□□□□□ -1.4
GTF2E1-205ENST00000497393 PRAMEF27A3QJZ7 478 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 GNB5O14775 395 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 EIF4EBP3O60516 100 aaPredicted RBP6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 AOC2O75106 756 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 ZNF165P49910 485 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 RBL2Q08999 1139 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 DUOXA2Q1HG44 320 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 KIAA1211Q6ZU35 1233 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 C12orf40Q86WS4 652 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 HNRNPLLQ8WVV9 542 aaKnown RBP6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 RUSC1Q9BVN2 902 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
GTF2E1-205ENST00000497393 ZC3H12AQ5D1E8 599 aaKnown RBP6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 AKAP4Q5JQC9 854 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 ANKS3Q6ZW76 656 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 REXO1Q8N1G1 1221 aaKnown RBP6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 MKL2Q9ULH7 1088 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 PPP1R9AQ9ULJ8 1098 aa6.27□□□□□ -1.41
GTF2E1-205ENST00000497393 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 WIPF1O43516 503 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 DNAJA2O60884 412 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 HTR3BO95264 441 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 EIF6P56537 245 aaKnown RBP6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 PPM1JQ5JR12 505 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 HP1BP3Q5SSJ5 553 aaPredicted RBP6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 DIEXFQ68CQ4 756 aaKnown RBP6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 CYFIP1Q7L576 1253 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 HDXQ7Z353 690 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 CKAP2LQ8IYA6 745 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 AGGF1Q8N302 714 aaeCLIP6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 PIF1Q9H611 641 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 EHMT1Q9H9B1 1298 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 PRKAG3Q9UGI9 489 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
GTF2E1-205ENST00000497393 ATE1O95260 518 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 GIPRP48546 466 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 ID3Q02535 119 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 RUFY4Q6ZNE9 571 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 DCAF11Q8TEB1 546 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 OSBPL2Q9H1P3 480 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 REV1Q9UBZ9 1251 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 AP4E1Q9UPM8 1137 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 SNCAIPQ9Y6H5 919 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
GTF2E1-205ENST00000497393 KLF4O43474 513 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 ADH5P11766 374 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 ELNP15502 786 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 PLCG1P19174 1290 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 GRK4P32298 578 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 NTF4P34130 210 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 HNRNPUQ00839 825 aaKnown RBP eCLIP6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 RING1Q06587 406 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 SERINC3Q13530 473 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 BMS1Q14692 1282 aaKnown RBP6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 GRIK4Q16099 956 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 OVOS1Q6IE37 1185 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 UBE3DQ7Z6J8 389 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 CRBNQ96SW2 442 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 RNF208Q9H0X6 261 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 CRIM1Q9NZV1 1036 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 PRR36Q9H6K5 1346 aa6.24□□□□□ -1.41
GTF2E1-205ENST00000497393 SPDYE3A6NKU9 549 aa6.23□□□□□ -1.41
GTF2E1-205ENST00000497393 PGRP06401 933 aa6.23□□□□□ -1.41
GTF2E1-205ENST00000497393 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
GTF2E1-205ENST00000497393 IMPDH2P12268 514 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms