RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CANXP27824 592 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 EXOSC9Q06265 439 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 DUSP27Q5VZP5 1158 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 TOM1L2Q6ZVM7 507 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 WDR63Q8IWG1 891 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 RTF1Q92541 710 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 BCL2L13Q9BXK5 485 aa6.15□□□□□ -1.42
CMSS1-209ENST00000497345 UBE2OQ9C0C9 1292 aaKnown RBP6.15□□□□□ -1.42
CMSS1-209ENST00000497345 IGSF1Q8N6C5 1336 aa6.15□□□□□ -1.43
CMSS1-209ENST00000497345 RTL1A6NKG5 1358 aa6.15□□□□□ -1.43
CMSS1-209ENST00000497345 USP54Q70EL1 1684 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 PHLPP1O60346 1717 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 TBC1D8BQ0IIM8 1120 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 CCINQ13939 588 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 TRAPPC3LQ5T215 181 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 ZNF530Q6P9A1 599 aaPredicted RBP6.14□□□□□ -1.43
CMSS1-209ENST00000497345 FRAT1Q92837 279 aaPredicted RBP6.14□□□□□ -1.43
CMSS1-209ENST00000497345 PNMA5Q96PV4 448 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 ARXQ96QS3 562 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 SEMA6BQ9H3T3 888 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 MYH16Q9H6N6 1097 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 FANCIQ9NVI1 1328 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 NHSL1Q5SYE7 1610 aa6.14□□□□□ -1.43
CMSS1-209ENST00000497345 BCAR3O75815 825 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 RRP1P56182 461 aaKnown RBP6.13□□□□□ -1.43
CMSS1-209ENST00000497345 LMOD3Q0VAK6 560 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 GRIK4Q16099 956 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 CCDC27Q2M243 656 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 PLEKHO1Q53GL0 409 aaPredicted RBP6.13□□□□□ -1.43
CMSS1-209ENST00000497345 XP32Q5T750 250 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 MPRIPQ6WCQ1 1025 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 NGEFQ8N5V2 710 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 RAPGEF4Q8WZA2 1011 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 NACC1Q96RE7 527 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 BTG4Q9NY30 223 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 KLK14Q9P0G3 267 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 SLC6A14Q9UN76 642 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 CCDC9Q9Y3X0 531 aaKnown RBP6.13□□□□□ -1.43
CMSS1-209ENST00000497345 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
CMSS1-209ENST00000497345 RGPD1P0DJD0 1748 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 DLG5Q8TDM6 1919 aa6.13□□□□□ -1.43
CMSS1-209ENST00000497345 GNAT3A8MTJ3 354 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 NFKB1P19838 968 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 WEE1P30291 646 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 INPP5BP32019 993 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 KRT24Q2M2I5 525 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 C1orf141Q5JVX7 400 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 KIF24Q5T7B8 1368 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 TRMT2AQ8IZ69 625 aaKnown RBP6.12□□□□□ -1.43
CMSS1-209ENST00000497345 FAM200AQ8TCP9 573 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 NUDT8Q8WV74 236 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 LGR6Q9HBX8 967 aa6.12□□□□□ -1.43
CMSS1-209ENST00000497345 JPH1Q9HDC5 661 aaPredicted RBP6.12□□□□□ -1.43
CMSS1-209ENST00000497345 DNAJB12Q9NXW2 375 aaKnown RBP6.12□□□□□ -1.43
CMSS1-209ENST00000497345 EPB42P16452 691 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 ITGB7P26010 798 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
CMSS1-209ENST00000497345 IDH3AP50213 366 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 GNAI1P63096 354 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 CALD1Q05682 793 aaKnown RBP6.11□□□□□ -1.43
CMSS1-209ENST00000497345 DGKZQ13574 1117 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 C11orf91Q3C1V1 193 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 C20orf194Q5TEA3 1177 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 PSAPL1Q6NUJ1 521 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 TSPYL6Q8N831 410 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 IL17REQ8NFR9 667 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 EXOC6Q8TAG9 804 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 DDX54Q8TDD1 881 aaKnown RBP6.11□□□□□ -1.43
CMSS1-209ENST00000497345 VTI1AQ96AJ9 217 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 C8orf37Q96NL8 207 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 TSPYL4Q9UJ04 414 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 TNNQ9UQP3 1299 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 ABCA3Q99758 1704 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 CRYBG1Q9Y4K1 1723 aa6.11□□□□□ -1.43
CMSS1-209ENST00000497345 CAMTA1Q9Y6Y1 1673 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 KDRP35968 1356 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 MAP3K5Q99683 1374 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 A0A0A0MRY4 1105 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 C9orf172C9J069 976 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 RFX1P22670 979 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 HSPA1LP34931 641 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 AFF1P51825 1210 aaKnown RBP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 RSPO4Q2I0M5 234 aaPredicted RBP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 MEX3CQ5U5Q3 659 aaKnown RBP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 Q8N3U1 123 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 QTRT2Q9H974 415 aaKnown RBP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 C11orf16Q9NQ32 467 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 TPSG1Q9NRR2 321 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 SMC4Q9NTJ3 1288 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 IFT57Q9NWB7 429 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 COL18A1P39060 1754 aa6.1□□□□□ -1.43
CMSS1-209ENST00000497345 AHDC1Q5TGY3 1603 aaPredicted RBP6.1□□□□□ -1.43
CMSS1-209ENST00000497345 CPDO75976 1380 aa6.09□□□□□ -1.43
CMSS1-209ENST00000497345 IL16Q14005 1332 aa6.09□□□□□ -1.43
CMSS1-209ENST00000497345 WDR17Q8IZU2 1322 aa6.09□□□□□ -1.43
CMSS1-209ENST00000497345 KCNQ3O43525 872 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms