RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 PRPF40BQ6NWY9 871 aaKnown RBP8.03□□□□□ -1.12
GGPS1-208ENST00000497327 GIMAP7Q8NHV1 300 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 CITED4Q96RK1 184 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 EHD4Q9H223 541 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 ACSS3Q9H6R3 686 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 FAM105AQ9NUU6 356 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 ADGRE2Q9UHX3 823 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 FGD6Q6ZV73 1430 aa8.03□□□□□ -1.12
GGPS1-208ENST00000497327 FAM170BA6NMN3 283 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 PRNPP04156 253 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
GGPS1-208ENST00000497327 GLIS3Q8NEA6 775 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 TBC1D32Q96NH3 1257 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 SEMA6CQ9H3T2 930 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 MIA2Q96PC5 1412 aa8.02□□□□□ -1.13
GGPS1-208ENST00000497327 ABCC10Q5T3U5 1492 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 EIF1AYO14602 144 aaKnown RBP8.01□□□□□ -1.13
GGPS1-208ENST00000497327 PAX4O43316 350 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 NFICP08651 508 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 AKAP4Q5JQC9 854 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 SEZ6L2Q6UXD5 910 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 METTL22Q9BUU2 404 aaPredicted RBP8.01□□□□□ -1.13
GGPS1-208ENST00000497327 YIPF2Q9BWQ6 316 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 NIF3L1Q9GZT8 377 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 DNAJC25Q9H1X3 360 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
GGPS1-208ENST00000497327 SUPT6HQ7KZ85 1726 aaKnown RBP8□□□□□ -1.13
GGPS1-208ENST00000497327 RAB6AP20340 208 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 FAAP100Q0VG06 881 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 HP1BP3Q5SSJ5 553 aaPredicted RBP8□□□□□ -1.13
GGPS1-208ENST00000497327 DYMQ7RTS9 669 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 ABI1Q8IZP0 508 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 RETREG2Q8NC44 543 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 WDR18Q9BV38 432 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 TCOF1Q13428 1488 aaKnown RBP8□□□□□ -1.13
GGPS1-208ENST00000497327 ADCY10Q96PN6 1610 aa8□□□□□ -1.13
GGPS1-208ENST00000497327 GPATCH8Q9UKJ3 1502 aaKnown RBP7.99□□□□□ -1.13
GGPS1-208ENST00000497327 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.99□□□□□ -1.13
GGPS1-208ENST00000497327 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 AOC2O75106 756 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 MAP7Q14244 749 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 DDX54Q8TDD1 881 aaKnown RBP7.99□□□□□ -1.13
GGPS1-208ENST00000497327 ZFYVE1Q9HBF4 777 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 C1GALT1Q9NS00 363 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 PPP1R9AQ9ULJ8 1098 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 AP4E1Q9UPM8 1137 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 SYNGAP1Q96PV0 1343 aa7.99□□□□□ -1.13
GGPS1-208ENST00000497327 DYNC1LI2O43237 492 aaPredicted RBP7.98□□□□□ -1.13
GGPS1-208ENST00000497327 AP3B2Q13367 1082 aa7.98□□□□□ -1.13
GGPS1-208ENST00000497327 GRM2Q14416 872 aa7.98□□□□□ -1.13
GGPS1-208ENST00000497327 RPS26P11Q5JNZ5 115 aaPredicted RBP7.98□□□□□ -1.13
GGPS1-208ENST00000497327 ALKBH8Q96BT7 664 aaKnown RBP7.98□□□□□ -1.13
GGPS1-208ENST00000497327 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
GGPS1-208ENST00000497327 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
GGPS1-208ENST00000497327 KIF14Q15058 1648 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 CYP26A1O43174 497 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 ASPAP45381 313 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 FAM50AQ14320 339 aaKnown RBP7.97□□□□□ -1.13
GGPS1-208ENST00000497327 COL19A1Q14993 1142 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 VSIG10LQ86VR7 867 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 EPS8L3Q8TE67 593 aaKnown RBP7.97□□□□□ -1.13
GGPS1-208ENST00000497327 WDR89Q96FK6 387 aaPredicted RBP7.97□□□□□ -1.13
GGPS1-208ENST00000497327 RBCK1Q9BYM8 510 aa7.97□□□□□ -1.13
GGPS1-208ENST00000497327 PTPRKQ15262 1439 aa7.96□□□□□ -1.13
GGPS1-208ENST00000497327 TMPRSS2O15393 492 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 GADD45BO75293 160 aaPredicted RBP7.96□□□□□ -1.14
GGPS1-208ENST00000497327 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 DMRTB1Q96MA1 342 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 KRTAP9-9Q9BYP9 154 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 KRTAP9-4Q9BYQ2 154 aa7.96□□□□□ -1.14
GGPS1-208ENST00000497327 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
GGPS1-208ENST00000497327 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.14
GGPS1-208ENST00000497327 ZCCHC11Q5TAX3 1644 aaKnown RBP7.96□□□□□ -1.14
GGPS1-208ENST00000497327 ZNF862O60290 1169 aa7.95□□□□□ -1.14
GGPS1-208ENST00000497327 ARID3AQ99856 593 aa7.95□□□□□ -1.14
GGPS1-208ENST00000497327 BSDC1Q9NW68 430 aaPredicted RBP7.95□□□□□ -1.14
GGPS1-208ENST00000497327 CFDP1Q9UEE9 299 aaPredicted RBP7.95□□□□□ -1.14
GGPS1-208ENST00000497327 ZC3H7BQ9UGR2 993 aaKnown RBP7.95□□□□□ -1.14
GGPS1-208ENST00000497327 PCDHGC5Q9Y5F6 944 aa7.95□□□□□ -1.14
GGPS1-208ENST00000497327 ZNF644Q9H582 1327 aaPredicted RBP7.95□□□□□ -1.14
GGPS1-208ENST00000497327 RIMBP3CA6NJZ7 1639 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 RIMBP3BA6NNM3 1639 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 PTPN23Q9H3S7 1636 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 RIMBP3Q9UFD9 1639 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 SOWAHDA6NJG2 315 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 LIG1P18858 919 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 TXKP42681 527 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
GGPS1-208ENST00000497327 PI16Q6UXB8 463 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 CRIM1Q9NZV1 1036 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 TRAK1Q9UPV9 953 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 RNF114Q9Y508 228 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 ASXL2Q76L83 1435 aa7.94□□□□□ -1.14
GGPS1-208ENST00000497327 WDR7Q9Y4E6 1490 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms