RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 DBNDD2Q9BQY9 259 aa8.4□□□□□ -1.06
SNX13-211ENST00000496855 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
SNX13-211ENST00000496855 PCDHA4Q9UN74 947 aa8.4□□□□□ -1.06
SNX13-211ENST00000496855 LMNB1P20700 586 aa8.39□□□□□ -1.07
SNX13-211ENST00000496855 PTPN11Q06124 597 aaPredicted RBP8.39□□□□□ -1.07
SNX13-211ENST00000496855 TTLL4Q14679 1199 aa8.39□□□□□ -1.07
SNX13-211ENST00000496855 MFSD14AQ96MC6 490 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 DAGLAQ9Y4D2 1042 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 HCLS1P14317 486 aaPredicted RBP8.38□□□□□ -1.07
SNX13-211ENST00000496855 ZMYM1Q5SVZ6 1142 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 SMYD4Q8IYR2 804 aaPredicted RBP8.38□□□□□ -1.07
SNX13-211ENST00000496855 RNF214Q8ND24 703 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 RGS22Q8NE09 1264 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 TLR6Q9Y2C9 796 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
SNX13-211ENST00000496855 CSADQ9Y600 493 aa8.38□□□□□ -1.07
SNX13-211ENST00000496855 RNGTTO60942 597 aaKnown RBP8.37□□□□□ -1.07
SNX13-211ENST00000496855 NEFMP07197 916 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
SNX13-211ENST00000496855 RING1Q06587 406 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 SEPT6Q14141 434 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 INPP5AQ14642 412 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 SEZ6L2Q6UXD5 910 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 C12orf40Q86WS4 652 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 ZDHHC13Q8IUH4 622 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 PHC3Q8NDX5 983 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 SHKBP1Q8TBC3 707 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
SNX13-211ENST00000496855 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
SNX13-211ENST00000496855 PPM1JQ5JR12 505 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.36□□□□□ -1.07
SNX13-211ENST00000496855 FBXL6Q8N531 539 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 RSRP1Q9BUV0 290 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 LGR6Q9HBX8 967 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 RNF112Q9ULX5 631 aa8.36□□□□□ -1.07
SNX13-211ENST00000496855 F13BP05160 661 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 ADMP35318 185 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 LRFN4Q6PJG9 635 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 ZAR1Q86SH2 424 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 RELL1Q8IUW5 271 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 GATA6Q92908 595 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 ISL2Q96A47 359 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 PLPPR2Q96GM1 343 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 TBC1D32Q96NH3 1257 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 C1GALT1Q9NS00 363 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 PCOLCE2Q9UKZ9 415 aa8.35□□□□□ -1.07
SNX13-211ENST00000496855 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 F6X3S4 739 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 FANCGO15287 622 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 NTF4P34130 210 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 PWP1Q13610 501 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 HDXQ7Z353 690 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 GIMAP7Q8NHV1 300 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 TMEM74Q96NL1 305 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
SNX13-211ENST00000496855 WIPI1Q5MNZ9 446 aaPredicted RBP8.33□□□□□ -1.08
SNX13-211ENST00000496855 ZBTB37Q5TC79 503 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 CYFIP1Q7L576 1253 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 ERMP1Q7Z2K6 904 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 SHISA5Q8N114 240 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
SNX13-211ENST00000496855 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
SNX13-211ENST00000496855 PRR19A6NJB7 356 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 TGFB1P01137 390 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 GBP2P32456 591 aaPredicted RBP8.32□□□□□ -1.08
SNX13-211ENST00000496855 CDK8P49336 464 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 LMNB2Q03252 620 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
SNX13-211ENST00000496855 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNX13-211ENST00000496855 RHOVQ96L33 236 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 PRAMEF27A3QJZ7 478 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 PF4P02776 101 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 CCDC84Q86UT8 332 aaPredicted RBP8.32□□□□□ -1.08
SNX13-211ENST00000496855 JARID2Q92833 1246 aaPredicted RBP8.32□□□□□ -1.08
SNX13-211ENST00000496855 OSBPL1AQ9BXW6 950 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 KBTBD4Q9NVX7 518 aa8.32□□□□□ -1.08
SNX13-211ENST00000496855 FAM170BA6NMN3 283 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 MINDY4BA8MYZ0 360 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 GFRA2O00451 464 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 VAMP1P23763 118 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 CDK5R2Q13319 367 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 CPSF6Q16630 551 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNX13-211ENST00000496855 HS2ST1Q7LGA3 356 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 METTL22Q9BUU2 404 aaPredicted RBP8.31□□□□□ -1.08
SNX13-211ENST00000496855 COPRSQ9NQ92 184 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 GGT7Q9UJ14 662 aa8.31□□□□□ -1.08
SNX13-211ENST00000496855 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
SNX13-211ENST00000496855 BNC2Q6ZN30 1099 aaPredicted RBP8.3□□□□□ -1.08
SNX13-211ENST00000496855 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
SNX13-211ENST00000496855 ZNF507Q8TCN5 953 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms