RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ENTPD3O75355 529 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 SLC10A3P09131 477 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 SDSP20132 328 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 TCP10Q12799 353 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 PICALMQ13492 652 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 ZSCAN25Q6NSZ9 544 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 HAUS7Q99871 368 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 IDI2Q9BXS1 227 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 ZNF341Q9BYN7 854 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 THSD7BQ9C0I4 1608 aa9.85□□□□□ -0.83
SMARCD3-215ENST00000496530 AKAP11Q9UKA4 1901 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 AOC2O75106 756 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 CYP7A1P22680 504 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 SREBF2Q12772 1141 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 RASAL3Q86YV0 1011 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 TEX11Q8IYF3 940 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 TRIM34Q9BYJ4 488 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 OSBPL3Q9H4L5 887 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 ANTXR1Q9H6X2 564 aa9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 AATFQ9NY61 560 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMARCD3-215ENST00000496530 USP2O75604 605 aaPredicted RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 NPM3O75607 178 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 ZBTB48P10074 688 aaPredicted RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 CTCFP49711 727 aaPredicted RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 INHBEP58166 350 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 MAP3K9P80192 1104 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 OTUD7BQ6GQQ9 843 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 MOB2Q70IA6 237 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 MAGEB6Q8N7X4 407 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 TEPSINQ96N21 525 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 CSRNP1Q96S65 589 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 DHX36Q9H2U1 1008 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 WBP1LQ9NX94 342 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 DOCK2Q92608 1830 aa9.83□□□□□ -0.84
SMARCD3-215ENST00000496530 AOX1Q06278 1338 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 MANSC4A6NHS7 340 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 FAM155AB1AL88 458 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 WDHD1O75717 1129 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 HLA-DOAP06340 250 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 USP5P45974 858 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 KIF23Q02241 960 aaPredicted RBP9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 LDLRAD1Q5T700 205 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 SLC9C2Q5TAH2 1124 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 WRNIP1Q96S55 665 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 RTN4Q9NQC3 1192 aaKnown RBP9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 DIAPH3Q9NSV4 1193 aa9.82□□□□□ -0.84
SMARCD3-215ENST00000496530 SSC5DA1L4H1 1573 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 ALDH1A1P00352 501 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 GSPT1P15170 499 aaKnown RBP9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 RHBDL3P58872 404 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 PPP4CP60510 307 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 NFIAQ12857 509 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 BMP2KLQ5H9B9 411 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 CWC27Q6UX04 472 aaKnown RBP9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 MIGA2Q7L4E1 593 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 AMOTL1Q8IY63 956 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 WNK4Q96J92 1243 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 CRNKL1Q9BZJ0 848 aaKnown RBP9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 OSBPL5Q9H0X9 879 aaPredicted RBP9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 SAGE1Q9NXZ1 904 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 FAM198AQ9UFP1 575 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 SALL3Q9BXA9 1300 aa9.81□□□□□ -0.84
SMARCD3-215ENST00000496530 COL2A1P02458 1487 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 RNF113AO15541 343 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 PDE6AP16499 860 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 MKRN3Q13064 507 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 SLFNL1Q499Z3 407 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 KIAA1211Q6ZU35 1233 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 CRACR2BQ8N4Y2 399 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 SH3RF3Q8TEJ3 882 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 TGFBRAP1Q8WUH2 860 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 OPTNQ96CV9 577 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 ELP3Q9H9T3 547 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 PICK1Q9NRD5 415 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 PI4KBQ9UBF8 816 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 HERC5Q9UII4 1024 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 MYO5AQ9Y4I1 1855 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 ZNF532Q9HCE3 1301 aa9.8□□□□□ -0.84
SMARCD3-215ENST00000496530 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 RFX7Q2KHR2 1363 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 ATRNL1Q5VV63 1379 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 HIP1O00291 1037 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 FOXN1O15353 648 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 TBC1D12O60347 775 aa9.79□□□□□ -0.84
SMARCD3-215ENST00000496530 CDC45O75419 566 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms