RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 DDTLA6NHG4 134 aaPredicted RBP17.69■□□□□ 0.42
PDAP1-204ENST00000496335 CAPN15O75808 1086 aa17.69■□□□□ 0.42
PDAP1-204ENST00000496335 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
PDAP1-204ENST00000496335 SLURP2P0DP57 97 aa17.69■□□□□ 0.42
PDAP1-204ENST00000496335 INPP5BP32019 993 aa17.69■□□□□ 0.42
PDAP1-204ENST00000496335 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
PDAP1-204ENST00000496335 ZSCAN29Q8IWY8 852 aaPredicted RBP17.69■□□□□ 0.42
PDAP1-204ENST00000496335 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
PDAP1-204ENST00000496335 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDAP1-204ENST00000496335 INHBEP58166 350 aa17.68■□□□□ 0.42
PDAP1-204ENST00000496335 IFNL1Q8IU54 200 aa17.68■□□□□ 0.42
PDAP1-204ENST00000496335 SH3RF3Q8TEJ3 882 aaPredicted RBP17.68■□□□□ 0.42
PDAP1-204ENST00000496335 OTUD5Q96G74 571 aa17.68■□□□□ 0.42
PDAP1-204ENST00000496335 R3HDMLQ9H3Y0 253 aa17.68■□□□□ 0.42
PDAP1-204ENST00000496335 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDAP1-204ENST00000496335 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 SMARCA5O60264 1052 aaPredicted RBP17.67■□□□□ 0.42
PDAP1-204ENST00000496335 IDH1O75874 414 aaKnown RBP17.67■□□□□ 0.42
PDAP1-204ENST00000496335 TEX11Q8IYF3 940 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 MS4A4AQ96JQ5 239 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 PTPN18Q99952 460 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 ZNF112Q9UJU3 913 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 CDK5RAP2Q96SN8 1893 aa17.67■□□□□ 0.42
PDAP1-204ENST00000496335 SPDYE5A6NIY4 337 aa17.66■□□□□ 0.42
PDAP1-204ENST00000496335 ERO1BQ86YB8 467 aa17.66■□□□□ 0.42
PDAP1-204ENST00000496335 NOL10Q9BSC4 688 aaKnown RBP17.66■□□□□ 0.42
PDAP1-204ENST00000496335 PCDHB15Q9Y5E8 787 aa17.66■□□□□ 0.42
PDAP1-204ENST00000496335 TESPA1A2RU30 521 aaPredicted RBP17.65■□□□□ 0.42
PDAP1-204ENST00000496335 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
PDAP1-204ENST00000496335 BAG3O95817 575 aa17.65■□□□□ 0.42
PDAP1-204ENST00000496335 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
PDAP1-204ENST00000496335 CYP7A1P22680 504 aa17.65■□□□□ 0.42
PDAP1-204ENST00000496335 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
PDAP1-204ENST00000496335 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
PDAP1-204ENST00000496335 CCL15-CCL14A0A0B4J2E2 113 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 IRF6O14896 467 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 ALDH1A1P00352 501 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 PPP4CP60510 307 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 DYNLL1P63167 89 aaKnown RBP17.64■□□□□ 0.41
PDAP1-204ENST00000496335 DGKZQ13574 1117 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 CCL15Q16663 113 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 MAGEB6Q8N7X4 407 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 ZNF296Q8WUU4 475 aaPredicted RBP17.64■□□□□ 0.41
PDAP1-204ENST00000496335 CRBNQ96SW2 442 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
PDAP1-204ENST00000496335 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
PDAP1-204ENST00000496335 DCTPP1Q9H773 170 aa17.64■□□□□ 0.41
PDAP1-204ENST00000496335 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 GPR25O00155 361 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 GTF2A2P52657 109 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 MAP3K10Q02779 954 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 MIGA1Q8NAN2 632 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 TGFBRAP1Q8WUH2 860 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
PDAP1-204ENST00000496335 ABHD8Q96I13 439 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 FOCADQ5VW36 1801 aa17.63■□□□□ 0.41
PDAP1-204ENST00000496335 GOLIM4O00461 696 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 IGSF3O75054 1194 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 PLCG2P16885 1265 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 PPATQ06203 517 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 PPIL2Q13356 520 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 NOL9Q5SY16 702 aaKnown RBP17.62■□□□□ 0.41
PDAP1-204ENST00000496335 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 MAPKAPK5Q8IW41 473 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.62■□□□□ 0.41
PDAP1-204ENST00000496335 BOLA2Q9H3K6 86 aa17.62■□□□□ 0.41
PDAP1-204ENST00000496335 CRHR2Q13324 411 aa17.61■□□□□ 0.41
PDAP1-204ENST00000496335 SNAPC2Q13487 334 aa17.61■□□□□ 0.41
PDAP1-204ENST00000496335 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
PDAP1-204ENST00000496335 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
PDAP1-204ENST00000496335 CETPP11597 493 aa17.6■□□□□ 0.41
PDAP1-204ENST00000496335 ATP5JP18859 108 aa17.6■□□□□ 0.41
PDAP1-204ENST00000496335 SCYL3Q8IZE3 742 aa17.6■□□□□ 0.41
PDAP1-204ENST00000496335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.6■□□□□ 0.41
PDAP1-204ENST00000496335 FLT1P17948 1338 aa17.6■□□□□ 0.41
PDAP1-204ENST00000496335 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
PDAP1-204ENST00000496335 SIPA1L1O43166 1804 aa17.6■□□□□ 0.41
PDAP1-204ENST00000496335 MYH1P12882 1939 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 TBC1D12O60347 775 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 FKTNO75072 461 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 PDE6AP16499 860 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 NOM1Q5C9Z4 860 aaKnown RBP17.59■□□□□ 0.41
PDAP1-204ENST00000496335 SLC9C2Q5TAH2 1124 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
PDAP1-204ENST00000496335 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
PDAP1-204ENST00000496335 SAP30BPQ9UHR5 308 aaKnown RBP17.59■□□□□ 0.41
PDAP1-204ENST00000496335 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 CTNND1O60716 968 aaKnown RBP17.58■□□□□ 0.4
PDAP1-204ENST00000496335 PTPRAP18433 802 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 TAF1CQ15572 869 aaPredicted RBP17.58■□□□□ 0.4
PDAP1-204ENST00000496335 CTU1Q7Z7A3 348 aaKnown RBP17.58■□□□□ 0.4
PDAP1-204ENST00000496335 HAUS7Q99871 368 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 PICK1Q9NRD5 415 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
PDAP1-204ENST00000496335 KCNH4Q9UQ05 1017 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 335.1 ms