RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PLEKHF1Q96S99 279 aa12.38□□□□□ -0.43
SMARCAL1-213ENST00000496037 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
SMARCAL1-213ENST00000496037 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
SMARCAL1-213ENST00000496037 JAG2Q9Y219 1238 aa12.38□□□□□ -0.43
SMARCAL1-213ENST00000496037 HOXB7P09629 217 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 CYP2C8P10632 490 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 TTF2Q9UNY4 1162 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 MGAMO43451 1857 aa12.37□□□□□ -0.43
SMARCAL1-213ENST00000496037 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-213ENST00000496037 COA7Q96BR5 231 aa12.36□□□□□ -0.43
SMARCAL1-213ENST00000496037 HMX1Q9NP08 348 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-213ENST00000496037 SNPHO15079 494 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 HMGCRP04035 888 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 IL1R1P14778 569 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 RIPK4P57078 832 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 ZNF341Q9BYN7 854 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 KCNH4Q9UQ05 1017 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 PFASO15067 1338 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
SMARCAL1-213ENST00000496037 CHRNDQ07001 517 aa12.34□□□□□ -0.43
SMARCAL1-213ENST00000496037 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
SMARCAL1-213ENST00000496037 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
SMARCAL1-213ENST00000496037 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
SMARCAL1-213ENST00000496037 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
SMARCAL1-213ENST00000496037 CRKP46108 304 aa12.33□□□□□ -0.44
SMARCAL1-213ENST00000496037 C15orf52Q6ZUT6 534 aaKnown RBP12.33□□□□□ -0.44
SMARCAL1-213ENST00000496037 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
SMARCAL1-213ENST00000496037 DNAH12Q6ZR08 3092 aa12.33□□□□□ -0.44
SMARCAL1-213ENST00000496037 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 ITGA6P23229 1130 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 INPP5BP32019 993 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 CACNB3P54284 484 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 MOGSQ13724 837 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 PRKAG2Q9UGJ0 569 aa12.32□□□□□ -0.44
SMARCAL1-213ENST00000496037 MYH3P11055 1940 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 CHL1O00533 1208 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 LRRC26Q2I0M4 334 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 MIGA2Q7L4E1 593 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 FASTKD5Q7L8L6 764 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 FAM83AQ86UY5 434 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 ADAMTS19Q8TE59 1207 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 C1QTNF1Q9BXJ1 281 aa12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-213ENST00000496037 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 SNAP23O00161 211 aa12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 TAF5LO75529 589 aa12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 PPP1R37O75864 691 aa12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 SMAD3P84022 425 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 SNX27Q96L92 541 aa12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 UHRF1Q96T88 793 aaPredicted RBP12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 PHAXQ9H814 394 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-213ENST00000496037 CXCL11O14625 94 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 COL6A1P12109 1028 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 DUSP27Q5VZP5 1158 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 GADL1Q6ZQY3 521 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 ANKRD13CQ8N6S4 541 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
SMARCAL1-213ENST00000496037 NEXNQ0ZGT2 675 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 TRIM32Q13049 653 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 TEKT1Q969V4 418 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 ARID3AQ99856 593 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 THEGQ9P2T0 379 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
SMARCAL1-213ENST00000496037 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 SHHQ15465 462 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 FAM110CQ1W6H9 321 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 NOL9Q5SY16 702 aaKnown RBP12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 FKBP1CQ5VVH2 108 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 UBE3BQ7Z3V4 1068 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 ASB2Q96Q27 587 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 MAP3K2Q9Y2U5 619 aa12.27□□□□□ -0.45
SMARCAL1-213ENST00000496037 ANKRD18BA2A2Z9 1011 aa12.26□□□□□ -0.45
SMARCAL1-213ENST00000496037 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-213ENST00000496037 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
SMARCAL1-213ENST00000496037 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 HDLBPQ00341 1268 aaKnown RBP12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 C9orf50Q5SZB4 431 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 TMEM92Q6UXU6 159 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 TRIB2Q92519 343 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 MAST2Q6P0Q8 1798 aa12.25□□□□□ -0.45
SMARCAL1-213ENST00000496037 MRPS5P82675 430 aaKnown RBP12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 MAP3K21Q5TCX8 1036 aa12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms