RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
C9orf78-207ENST00000495934 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
C9orf78-207ENST00000495934 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
C9orf78-207ENST00000495934 ZDHHC15Q96MV8 337 aa12.98□□□□□ -0.33
C9orf78-207ENST00000495934 MYH16Q9H6N6 1097 aa12.98□□□□□ -0.33
C9orf78-207ENST00000495934 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
C9orf78-207ENST00000495934 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
C9orf78-207ENST00000495934 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
C9orf78-207ENST00000495934 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
C9orf78-207ENST00000495934 TRIM32Q13049 653 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
C9orf78-207ENST00000495934 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
C9orf78-207ENST00000495934 ANKRD13CQ8N6S4 541 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
C9orf78-207ENST00000495934 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
C9orf78-207ENST00000495934 SLC45A1Q9Y2W3 748 aa12.97□□□□□ -0.33
C9orf78-207ENST00000495934 TNFRSF10AO00220 468 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 TBC1D22AQ8WUA7 517 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
C9orf78-207ENST00000495934 FOXO4P98177 505 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 FAM110CQ1W6H9 321 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 G2E3Q7L622 706 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 FAM151AQ8WW52 585 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 FAM122AQ96E09 287 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
C9orf78-207ENST00000495934 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 ZHX2Q9Y6X8 837 aa12.95□□□□□ -0.34
C9orf78-207ENST00000495934 MAST3O60307 1309 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 FANCIQ9NVI1 1328 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 FRAT2O75474 233 aaPredicted RBP12.94□□□□□ -0.34
C9orf78-207ENST00000495934 COL6A1P12109 1028 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 TCP10Q12799 353 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 TRMT2AQ8IZ69 625 aaKnown RBP12.94□□□□□ -0.34
C9orf78-207ENST00000495934 MRIQ9BWK5 157 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
C9orf78-207ENST00000495934 PLXNB2O15031 1838 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 FOSL2P15408 326 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 PTPRAP18433 802 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 SLFN5Q08AF3 891 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 TJAP1Q5JTD0 557 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 LMBR1LQ6UX01 489 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 SCYL3Q8IZE3 742 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 PICK1Q9NRD5 415 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 AFG3L2Q9Y4W6 797 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 DOCK1Q14185 1865 aa12.93□□□□□ -0.34
C9orf78-207ENST00000495934 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
C9orf78-207ENST00000495934 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
C9orf78-207ENST00000495934 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
C9orf78-207ENST00000495934 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 TRIB2Q92519 343 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 AGTPBP1Q9UPW5 1226 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
C9orf78-207ENST00000495934 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 VAMP4O75379 141 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 NFIAQ12857 509 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 MAP3K21Q5TCX8 1036 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
C9orf78-207ENST00000495934 GJD2Q9UKL4 321 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
C9orf78-207ENST00000495934 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 SLC4A2P04920 1241 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 FLIIQ13045 1269 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
C9orf78-207ENST00000495934 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
C9orf78-207ENST00000495934 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 E9PSI1 815 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 CYP2B6P20813 491 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 TREML2Q5T2D2 321 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
C9orf78-207ENST00000495934 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
C9orf78-207ENST00000495934 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
C9orf78-207ENST00000495934 SHHQ15465 462 aa12.88□□□□□ -0.35
C9orf78-207ENST00000495934 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
C9orf78-207ENST00000495934 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
C9orf78-207ENST00000495934 PRKAG2Q9UGJ0 569 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms