RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 HMMRO75330 724 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 CETPP11597 493 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 RHBDL3P58872 404 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 PDE3AQ14432 1141 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 CCL15Q16663 113 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 NOL9Q5SY16 702 aaKnown RBP29.69■■■□□ 2.34
HLA-C-209ENST00000495835 BRI3BPQ8WY22 251 aa29.69■■■□□ 2.34
HLA-C-209ENST00000495835 DBNLQ9UJU6 430 aaKnown RBP29.69■■■□□ 2.34
HLA-C-209ENST00000495835 DOCK2Q92608 1830 aa29.68■■■□□ 2.34
HLA-C-209ENST00000495835 SNAPC2Q13487 334 aa29.68■■■□□ 2.34
HLA-C-209ENST00000495835 ZFPM1Q8IX07 1006 aa29.68■■■□□ 2.34
HLA-C-209ENST00000495835 EAF2Q96CJ1 260 aaPredicted RBP29.68■■■□□ 2.34
HLA-C-209ENST00000495835 COG6Q9Y2V7 657 aa29.68■■■□□ 2.34
HLA-C-209ENST00000495835 ATRNL1Q5VV63 1379 aa29.67■■■□□ 2.34
HLA-C-209ENST00000495835 IRF6O14896 467 aa29.66■■■□□ 2.34
HLA-C-209ENST00000495835 INPP5BP32019 993 aa29.66■■■□□ 2.34
HLA-C-209ENST00000495835 CRHR2Q13324 411 aa29.66■■■□□ 2.34
HLA-C-209ENST00000495835 ZSCAN29Q8IWY8 852 aaPredicted RBP29.66■■■□□ 2.34
HLA-C-209ENST00000495835 NOL10Q9BSC4 688 aaKnown RBP29.66■■■□□ 2.34
HLA-C-209ENST00000495835 EXOC6BQ9Y2D4 811 aa29.66■■■□□ 2.34
HLA-C-209ENST00000495835 CYP2E1P05181 493 aaPredicted RBP29.65■■■□□ 2.34
HLA-C-209ENST00000495835 RGS19P49795 217 aa29.65■■■□□ 2.34
HLA-C-209ENST00000495835 TMED8Q6PL24 325 aaPredicted RBP29.65■■■□□ 2.34
HLA-C-209ENST00000495835 CCDC8Q9H0W5 538 aaPredicted RBP29.65■■■□□ 2.34
HLA-C-209ENST00000495835 DDX4Q9NQI0 724 aaKnown RBP29.65■■■□□ 2.34
HLA-C-209ENST00000495835 SNRKQ9NRH2 765 aa29.65■■■□□ 2.34
HLA-C-209ENST00000495835 COL2A1P02458 1487 aaPredicted RBP29.65■■■□□ 2.34
HLA-C-209ENST00000495835 MAST2Q6P0Q8 1798 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 TBC1D12O60347 775 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 BAG3O95817 575 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 PLCG2P16885 1265 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 NAA16Q6N069 864 aaPredicted RBP29.64■■■□□ 2.34
HLA-C-209ENST00000495835 SH3BP5LQ7L8J4 393 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 ZFYVE28Q9HCC9 887 aa29.64■■■□□ 2.34
HLA-C-209ENST00000495835 DDTLA6NHG4 134 aaPredicted RBP29.63■■■□□ 2.33
HLA-C-209ENST00000495835 PHF20L1A8MW92 1017 aa29.63■■■□□ 2.33
HLA-C-209ENST00000495835 PPP4CP60510 307 aa29.63■■■□□ 2.33
HLA-C-209ENST00000495835 ERO1AQ96HE7 468 aa29.63■■■□□ 2.33
HLA-C-209ENST00000495835 KCNH4Q9UQ05 1017 aa29.63■■■□□ 2.33
HLA-C-209ENST00000495835 ZAP70P43403 619 aa29.62■■■□□ 2.33
HLA-C-209ENST00000495835 PICALMQ13492 652 aa29.62■■■□□ 2.33
HLA-C-209ENST00000495835 FBXO46Q6PJ61 603 aaPredicted RBP29.62■■■□□ 2.33
HLA-C-209ENST00000495835 RHPN1Q8TCX5 695 aa29.62■■■□□ 2.33
HLA-C-209ENST00000495835 KIF1BPQ96EK5 621 aa29.62■■■□□ 2.33
HLA-C-209ENST00000495835 TLR7Q9NYK1 1049 aaKnown RBP29.62■■■□□ 2.33
HLA-C-209ENST00000495835 RAB11FIP3O75154 756 aa29.61■■■□□ 2.33
HLA-C-209ENST00000495835 SP3Q02447 781 aa29.61■■■□□ 2.33
HLA-C-209ENST00000495835 TAF1CQ15572 869 aaPredicted RBP29.61■■■□□ 2.33
HLA-C-209ENST00000495835 CXCL11O14625 94 aa29.6■■■□□ 2.33
HLA-C-209ENST00000495835 AACSQ86V21 672 aa29.6■■■□□ 2.33
HLA-C-209ENST00000495835 SCYL3Q8IZE3 742 aa29.6■■■□□ 2.33
HLA-C-209ENST00000495835 CLASRPQ8N2M8 674 aaKnown RBP29.6■■■□□ 2.33
HLA-C-209ENST00000495835 FAM43AQ8N2R8 423 aa29.6■■■□□ 2.33
HLA-C-209ENST00000495835 CTNND1O60716 968 aaKnown RBP29.59■■■□□ 2.33
HLA-C-209ENST00000495835 CERS3Q8IU89 383 aa29.59■■■□□ 2.33
HLA-C-209ENST00000495835 SIRT2Q8IXJ6 389 aa29.59■■■□□ 2.33
HLA-C-209ENST00000495835 TEX11Q8IYF3 940 aa29.59■■■□□ 2.33
HLA-C-209ENST00000495835 OSBPL5Q9H0X9 879 aaPredicted RBP29.59■■■□□ 2.33
HLA-C-209ENST00000495835 HPS5Q9UPZ3 1129 aa29.59■■■□□ 2.33
HLA-C-209ENST00000495835 BTBD19C9JJ37 291 aa29.58■■■□□ 2.33
HLA-C-209ENST00000495835 ARHGEF6Q15052 776 aa29.58■■■□□ 2.33
HLA-C-209ENST00000495835 DHX36Q9H2U1 1008 aaKnown RBP29.58■■■□□ 2.33
HLA-C-209ENST00000495835 MYO5AQ9Y4I1 1855 aaKnown RBP29.58■■■□□ 2.33
HLA-C-209ENST00000495835 ANKRD23Q86SG2 305 aa29.57■■■□□ 2.32
HLA-C-209ENST00000495835 PICK1Q9NRD5 415 aa29.57■■■□□ 2.32
HLA-C-209ENST00000495835 PIH1D3Q9NQM4 214 aaKnown RBP29.56■■■□□ 2.32
HLA-C-209ENST00000495835 AATFQ9NY61 560 aaKnown RBP eCLIP29.56■■■□□ 2.32
HLA-C-209ENST00000495835 TLR2O60603 784 aa29.55■■■□□ 2.32
HLA-C-209ENST00000495835 OTOP1Q7RTM1 612 aa29.55■■■□□ 2.32
HLA-C-209ENST00000495835 SH3RF3Q8TEJ3 882 aaPredicted RBP29.55■■■□□ 2.32
HLA-C-209ENST00000495835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.55■■■□□ 2.32
HLA-C-209ENST00000495835 IL1RAPL2Q9NP60 686 aa29.55■■■□□ 2.32
HLA-C-209ENST00000495835 HERC5Q9UII4 1024 aaKnown RBP29.55■■■□□ 2.32
HLA-C-209ENST00000495835 TRIM17Q9Y577 477 aa29.55■■■□□ 2.32
HLA-C-209ENST00000495835 PTPRAP18433 802 aa29.54■■■□□ 2.32
HLA-C-209ENST00000495835 TTF1Q15361 905 aaPredicted RBP29.54■■■□□ 2.32
HLA-C-209ENST00000495835 DOCK1Q14185 1865 aa29.53■■■□□ 2.32
HLA-C-209ENST00000495835 FOCADQ5VW36 1801 aa29.53■■■□□ 2.32
HLA-C-209ENST00000495835 MAP3K12Q12852 859 aa29.53■■■□□ 2.32
HLA-C-209ENST00000495835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.53■■■□□ 2.32
HLA-C-209ENST00000495835 PI4KBQ9UBF8 816 aa29.53■■■□□ 2.32
HLA-C-209ENST00000495835 ZHX2Q9Y6X8 837 aa29.53■■■□□ 2.32
HLA-C-209ENST00000495835 C20orf194Q5TEA3 1177 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 FASTKD5Q7L8L6 764 aaKnown RBP29.52■■■□□ 2.32
HLA-C-209ENST00000495835 ADGRA1Q86SQ6 560 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 CD99L2Q8TCZ2 262 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 TBC1D2Q9BYX2 928 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 EFCC1Q9HA90 598 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 AFG3L2Q9Y4W6 797 aa29.52■■■□□ 2.32
HLA-C-209ENST00000495835 CDK5RAP2Q96SN8 1893 aa29.51■■■□□ 2.31
HLA-C-209ENST00000495835 IDH1O75874 414 aaKnown RBP29.51■■■□□ 2.31
HLA-C-209ENST00000495835 IFIT2P09913 472 aaKnown RBP29.51■■■□□ 2.31
HLA-C-209ENST00000495835 CYP7A1P22680 504 aa29.51■■■□□ 2.31
HLA-C-209ENST00000495835 MLLT1Q03111 559 aaPredicted RBP29.51■■■□□ 2.31
HLA-C-209ENST00000495835 MOGSQ13724 837 aa29.51■■■□□ 2.31
HLA-C-209ENST00000495835 A0A0G2JLL6 359 aaPredicted RBP29.49■■■□□ 2.31
HLA-C-209ENST00000495835 PDHXO00330 501 aa29.49■■■□□ 2.31
HLA-C-209ENST00000495835 PRRT2Q7Z6L0 340 aaPredicted RBP29.49■■■□□ 2.31
HLA-C-209ENST00000495835 FOXP4Q8IVH2 680 aaPredicted RBP29.49■■■□□ 2.31
HLA-C-209ENST00000495835 TGFBRAP1Q8WUH2 860 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms