RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 YDJCA8MPS7 323 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 USP17L12C9JPN9 530 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 USP17L21D6R901 530 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 DDIT3P35638 169 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 CHMP4CQ96CF2 233 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 MCM9Q9NXL9 1143 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 TPCN1Q9ULQ1 816 aa28.78■■■□□ 2.2
PPP1R3F-205ENST00000495799 FOCADQ5VW36 1801 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 NEDD4P46934 1319 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 COL9A3Q14050 684 aaPredicted RBP28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 TGFBRAP1Q8WUH2 860 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 BRF1Q92994 677 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 TMEM87BQ96K49 555 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 MTA3Q9BTC8 594 aa28.77■■■□□ 2.2
PPP1R3F-205ENST00000495799 B4E1Z4 1266 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 CRKP46108 304 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 RHBDL3P58872 404 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 ILDR2Q71H61 639 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 JDP2Q8WYK2 163 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 MKRN1Q9UHC7 482 aaKnown RBP28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 SERPINA10Q9UK55 444 aa28.76■■■□□ 2.19
PPP1R3F-205ENST00000495799 SCNN1DP51172 638 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 ME3Q16798 604 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 RSBN1LQ6PCB5 846 aaPredicted RBP28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 KIAA0825Q8IV33 1275 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 ZDHHC15Q96MV8 337 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 LARP6Q9BRS8 491 aaKnown RBP28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 LRRC2Q9BYS8 371 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 TOMM22Q9NS69 142 aa28.75■■■□□ 2.19
PPP1R3F-205ENST00000495799 NLGN2Q8NFZ4 835 aa28.74■■■□□ 2.19
PPP1R3F-205ENST00000495799 ESR2Q92731 530 aa28.74■■■□□ 2.19
PPP1R3F-205ENST00000495799 VIL1P09327 827 aaKnown RBP28.74■■■□□ 2.19
PPP1R3F-205ENST00000495799 PDE4BQ07343 736 aa28.74■■■□□ 2.19
PPP1R3F-205ENST00000495799 SART3Q15020 963 aaKnown RBP28.74■■■□□ 2.19
PPP1R3F-205ENST00000495799 DDX60LQ5H9U9 1706 aaKnown RBP28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 NFKBIEO00221 500 aa28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 LARGE1O95461 756 aa28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 ANTXR2P58335 489 aa28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 RRP12Q5JTH9 1297 aaKnown RBP28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 CHST3Q7LGC8 479 aa28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 HDAC9Q9UKV0 1011 aa28.73■■■□□ 2.19
PPP1R3F-205ENST00000495799 FLT1P17948 1338 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 COL4A5P29400 1685 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 POLR3DP05423 398 aaPredicted RBP28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 FGRP09769 529 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 C12orf60Q5U649 245 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 MAPKAPK5Q8IW41 473 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 CCDC83Q8IWF9 413 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 ZNF274Q96GC6 653 aaPredicted RBP28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 ANGEL1Q9UNK9 670 aaKnown RBP28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 ROBO3Q96MS0 1386 aa28.72■■■□□ 2.19
PPP1R3F-205ENST00000495799 ECM29Q5VYK3 1845 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 KDM4AO75164 1064 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 EVCP57679 992 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 NUCB2P80303 420 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 CYB5R4Q7L1T6 521 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 USP40Q9NVE5 1235 aa28.71■■■□□ 2.19
PPP1R3F-205ENST00000495799 ERICH2A1L162 156 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 PSMD14O00487 310 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 ORC4O43929 436 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 USP17L8P0C7I0 530 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 RBM5P52756 815 aaKnown RBP eCLIP28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 ZNF287Q9HBT7 754 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 ZSWIM5Q9P217 1185 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 SMC3Q9UQE7 1217 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 MYH1P12882 1939 aa28.7■■■□□ 2.19
PPP1R3F-205ENST00000495799 ADAMTSL1Q8N6G6 1762 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 CYP2D7A0A087X1C5 515 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 SH2B2O14492 632 aaPredicted RBP28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 RAD17O75943 681 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 APOBRQ0VD83 1088 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 APOBEC3HQ6NTF7 200 aaKnown RBP28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 AGBL3Q8NEM8 1001 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 GTF3C6Q969F1 213 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 PFKFB2O60825 505 aa28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 FHDC1Q9C0D6 1143 aaPredicted RBP28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.69■■■□□ 2.18
PPP1R3F-205ENST00000495799 LIFRP42702 1097 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 MMP14P50281 582 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 TNIP1Q15025 636 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 TMEM67Q5HYA8 995 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 CIAPIN1Q6FI81 312 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 CDC42EP5Q6NZY7 148 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 STK11IPQ8N1F8 1099 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 UBAC1Q9BSL1 405 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 INCENPQ9NQS7 918 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 TACC3Q9Y6A5 838 aa28.68■■■□□ 2.18
PPP1R3F-205ENST00000495799 IFIT3O14879 490 aaKnown RBP28.67■■■□□ 2.18
PPP1R3F-205ENST00000495799 CYP2D6P10635 497 aa28.67■■■□□ 2.18
PPP1R3F-205ENST00000495799 TMTC2Q8N394 836 aa28.67■■■□□ 2.18
PPP1R3F-205ENST00000495799 OGFOD1Q8N543 542 aa28.67■■■□□ 2.18
PPP1R3F-205ENST00000495799 NECAB1Q8N987 351 aa28.67■■■□□ 2.18
PPP1R3F-205ENST00000495799 STK3Q13188 491 aa28.66■■■□□ 2.18
PPP1R3F-205ENST00000495799 IQCA1Q86XH1 822 aa28.66■■■□□ 2.18
PPP1R3F-205ENST00000495799 NAP1L2Q9ULW6 460 aaPredicted RBP28.66■■■□□ 2.18
PPP1R3F-205ENST00000495799 KLF18A0A0U1RQI7 1052 aa28.65■■■□□ 2.18
PPP1R3F-205ENST00000495799 TTC6Q86TZ1 520 aa28.65■■■□□ 2.18
PPP1R3F-205ENST00000495799 SGMS1Q86VZ5 419 aa28.65■■■□□ 2.18
PPP1R3F-205ENST00000495799 IGDCC4Q8TDY8 1250 aa28.65■■■□□ 2.18
PPP1R3F-205ENST00000495799 GMLQ99445 158 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms