RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
MRPL55-232ENST00000495434 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
MRPL55-232ENST00000495434 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
MRPL55-232ENST00000495434 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
MRPL55-232ENST00000495434 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
MRPL55-232ENST00000495434 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
MRPL55-232ENST00000495434 ATRNL1Q5VV63 1379 aa17.14■□□□□ 0.33
MRPL55-232ENST00000495434 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-232ENST00000495434 DOCK2Q92608 1830 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 GPR25O00155 361 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 IGF2BP3O00425 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
MRPL55-232ENST00000495434 BAG3O95817 575 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 PLCG2P16885 1265 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 PPP4CP60510 307 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 PPATQ06203 517 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 NOL9Q5SY16 702 aaKnown RBP17.13■□□□□ 0.33
MRPL55-232ENST00000495434 ABHD8Q96I13 439 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 IL1RAPL2Q9NP60 686 aa17.13■□□□□ 0.33
MRPL55-232ENST00000495434 MYO5AQ9Y4I1 1855 aaKnown RBP17.13■□□□□ 0.33
MRPL55-232ENST00000495434 PPIL2Q13356 520 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 SH3BP5LQ7L8J4 393 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-232ENST00000495434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
MRPL55-232ENST00000495434 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 PTPN18Q99952 460 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 MCOLN1Q9GZU1 580 aa17.12■□□□□ 0.33
MRPL55-232ENST00000495434 PIH1D3Q9NQM4 214 aaKnown RBP17.12■□□□□ 0.33
MRPL55-232ENST00000495434 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-232ENST00000495434 PHF20L1A8MW92 1017 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 TBC1D12O60347 775 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
MRPL55-232ENST00000495434 INPP5BP32019 993 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 PICALMQ13492 652 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 DGKZQ13574 1117 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 CERS3Q8IU89 383 aa17.11■□□□□ 0.33
MRPL55-232ENST00000495434 ZNF296Q8WUU4 475 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-232ENST00000495434 ZCCHC17Q9NP64 241 aaKnown RBP17.11■□□□□ 0.33
MRPL55-232ENST00000495434 IRF6O14896 467 aa17.1■□□□□ 0.33
MRPL55-232ENST00000495434 CETPP11597 493 aa17.1■□□□□ 0.33
MRPL55-232ENST00000495434 SNAPC2Q13487 334 aa17.1■□□□□ 0.33
MRPL55-232ENST00000495434 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-232ENST00000495434 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
MRPL55-232ENST00000495434 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
MRPL55-232ENST00000495434 BRI3BPQ8WY22 251 aa17.1■□□□□ 0.33
MRPL55-232ENST00000495434 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
MRPL55-232ENST00000495434 CCL15-CCL14A0A0B4J2E2 113 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 APBB1O00213 710 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 FKTNO75072 461 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 MAP3K12Q12852 859 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 PKN2Q16513 984 aaKnown RBP17.09■□□□□ 0.33
MRPL55-232ENST00000495434 CCL15Q16663 113 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-232ENST00000495434 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
MRPL55-232ENST00000495434 AATFQ9NY61 560 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-232ENST00000495434 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
MRPL55-232ENST00000495434 CAPN15O75808 1086 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 IDH1O75874 414 aaKnown RBP17.08■□□□□ 0.32
MRPL55-232ENST00000495434 CYP7A1P22680 504 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
MRPL55-232ENST00000495434 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 SCYL3Q8IZE3 742 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 DHX36Q9H2U1 1008 aaKnown RBP17.08■□□□□ 0.32
MRPL55-232ENST00000495434 KCNH4Q9UQ05 1017 aa17.08■□□□□ 0.32
MRPL55-232ENST00000495434 FOCADQ5VW36 1801 aa17.07■□□□□ 0.32
MRPL55-232ENST00000495434 CRHR2Q13324 411 aa17.07■□□□□ 0.32
MRPL55-232ENST00000495434 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
MRPL55-232ENST00000495434 DCTPP1Q9H773 170 aa17.07■□□□□ 0.32
MRPL55-232ENST00000495434 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
MRPL55-232ENST00000495434 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
MRPL55-232ENST00000495434 CXCL11O14625 94 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 ATP5JP18859 108 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 ZFYVE28Q9HCC9 887 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 PICK1Q9NRD5 415 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
MRPL55-232ENST00000495434 PTPRAP18433 802 aa17.05■□□□□ 0.32
MRPL55-232ENST00000495434 TAF1CQ15572 869 aaPredicted RBP17.05■□□□□ 0.32
MRPL55-232ENST00000495434 FAM43AQ8N2R8 423 aa17.05■□□□□ 0.32
MRPL55-232ENST00000495434 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
MRPL55-232ENST00000495434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
MRPL55-232ENST00000495434 DOCK1Q14185 1865 aa17.05■□□□□ 0.32
MRPL55-232ENST00000495434 FLT1P17948 1338 aa17.04■□□□□ 0.32
MRPL55-232ENST00000495434 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
MRPL55-232ENST00000495434 ANKRD23Q86SG2 305 aa17.04■□□□□ 0.32
MRPL55-232ENST00000495434 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
MRPL55-232ENST00000495434 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-232ENST00000495434 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
MRPL55-232ENST00000495434 SP3Q02447 781 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 HAUS7Q99871 368 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 AFG3L2Q9Y4W6 797 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 ZHX2Q9Y6X8 837 aa17.03■□□□□ 0.32
MRPL55-232ENST00000495434 GOLIM4O00461 696 aa17.02■□□□□ 0.32
MRPL55-232ENST00000495434 TLR2O60603 784 aa17.02■□□□□ 0.32
MRPL55-232ENST00000495434 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.32
MRPL55-232ENST00000495434 MOGSQ13724 837 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms