RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 ADCY3O60266 1144 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 SGPL1O95470 568 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 PTPRAP18433 802 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 RGS3P49796 1198 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 PRRT2Q7Z6L0 340 aaPredicted RBP11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 SCYL3Q8IZE3 742 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 DIS3LQ8TF46 1054 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 LPIN2Q92539 896 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 HTATIP2Q9BUP3 242 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 ZHX2Q9Y6X8 837 aa11.8□□□□□ -0.52
GTF3C2-213ENST00000495298 DDTLA6NHG4 134 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 CXCL11O14625 94 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 SLC5A1P13866 664 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 PHKA1P46020 1223 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 UBXN2AP68543 259 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 CACNB1Q02641 598 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 DEFB118Q96PH6 123 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 SIL1Q9H173 461 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 UNC80Q8N2C7 3258 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
GTF3C2-213ENST00000495298 LOC285556D6RIA3 1793 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 ADORA1P30542 326 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 SSH1Q8WYL5 1049 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 ATAD5Q96QE3 1844 aa11.78□□□□□ -0.52
GTF3C2-213ENST00000495298 TRIM75PA6NK02 468 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 DLL1O00548 723 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 ZEB1P37275 1124 aaPredicted RBP11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 TRIM32Q13049 653 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 ATP2B3Q16720 1220 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 PAWRQ96IZ0 340 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 IDI2Q9BXS1 227 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 PA2G4Q9UQ80 394 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 GAKO14976 1311 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 SALL1Q9NSC2 1324 aa11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 DDX60LQ5H9U9 1706 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-213ENST00000495298 EVI5O60447 810 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 PICALMQ13492 652 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 SLC17A8Q8NDX2 589 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 ZNF384Q8TF68 577 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 PICK1Q9NRD5 415 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 PTPRCP08575 1304 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
GTF3C2-213ENST00000495298 PEX10O60683 326 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 ENTPD3O75355 529 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 IRF5Q13568 498 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 FASTKD5Q7L8L6 764 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 ZSCAN29Q8IWY8 852 aaPredicted RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 VCANP13611 3396 aa11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
GTF3C2-213ENST00000495298 BTDP43251 543 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 RHBDL3P58872 404 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 Q7L0L9 218 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 C7orf61Q8IZ16 206 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 DENND2AQ9ULE3 1009 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 AGTPBP1Q9UPW5 1226 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 SLC45A1Q9Y2W3 748 aa11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
GTF3C2-213ENST00000495298 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 CIAO1O76071 339 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 SYN1P17600 705 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 TIMM10P62072 90 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 GDF15Q99988 308 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
GTF3C2-213ENST00000495298 MROH7-TTC4A0A0A0MT08 1334 aa11.72□□□□□ -0.53
GTF3C2-213ENST00000495298 SPP2Q13103 211 aa11.72□□□□□ -0.53
GTF3C2-213ENST00000495298 FAM110CQ1W6H9 321 aa11.72□□□□□ -0.53
GTF3C2-213ENST00000495298 PI16Q6UXB8 463 aa11.72□□□□□ -0.53
GTF3C2-213ENST00000495298 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
GTF3C2-213ENST00000495298 TRIB2Q92519 343 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms