RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TMED8Q6PL24 325 aaPredicted RBP19.27■□□□□ 0.68
CBX4-204ENST00000495122 NEK1Q96PY6 1258 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 MYOZ2Q9NPC6 264 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 NDUFB9Q9Y6M9 179 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 MYO3BQ8WXR4 1341 aa19.26■□□□□ 0.67
CBX4-204ENST00000495122 PITPNM2Q9BZ72 1349 aa19.26■□□□□ 0.67
CBX4-204ENST00000495122 HSPD1P10809 573 aaKnown RBP19.26■□□□□ 0.67
CBX4-204ENST00000495122 STRIP1Q5VSL9 837 aa19.26■□□□□ 0.67
CBX4-204ENST00000495122 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 OTOFQ9HC10 1997 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 TRAK2O60296 914 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 ADD2P35612 726 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 HUNKP57058 714 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 SCARF1Q14162 830 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 ANGEL2Q5VTE6 544 aaKnown RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 FBXL16Q8N461 479 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 MXD3Q9BW11 206 aa19.25■□□□□ 0.67
CBX4-204ENST00000495122 GBA2Q9HCG7 927 aaPredicted RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 GNL3LQ9NVN8 582 aaKnown RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
CBX4-204ENST00000495122 CYP21A2P08686 494 aa19.24■□□□□ 0.67
CBX4-204ENST00000495122 SPATA5Q8NB90 893 aa19.24■□□□□ 0.67
CBX4-204ENST00000495122 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
CBX4-204ENST00000495122 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
CBX4-204ENST00000495122 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
CBX4-204ENST00000495122 SEMA3EO15041 775 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 PHKA1P46020 1223 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 MAP3K12Q12852 859 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 C15orf52Q6ZUT6 534 aaKnown RBP19.23■□□□□ 0.67
CBX4-204ENST00000495122 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 WDR19Q8NEZ3 1342 aa19.23■□□□□ 0.67
CBX4-204ENST00000495122 M0R2C6 588 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 SNAP23O00161 211 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 PDCP20941 246 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 IMMTQ16891 758 aaKnown RBP19.22■□□□□ 0.67
CBX4-204ENST00000495122 C2orf69Q8N8R5 385 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 BEGAINQ9BUH8 593 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 ATP6V1DQ9Y5K8 247 aa19.22■□□□□ 0.67
CBX4-204ENST00000495122 FAM155AB1AL88 458 aaPredicted RBP19.21■□□□□ 0.67
CBX4-204ENST00000495122 NOGQ13253 232 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 RGMBQ6NW40 437 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 NOL8Q76FK4 1167 aaKnown RBP19.21■□□□□ 0.67
CBX4-204ENST00000495122 DHX32Q7L7V1 743 aaKnown RBP19.21■□□□□ 0.67
CBX4-204ENST00000495122 HELBQ8NG08 1087 aaPredicted RBP19.21■□□□□ 0.67
CBX4-204ENST00000495122 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 CD209Q9NNX6 404 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 ZDHHC9Q9Y397 364 aa19.21■□□□□ 0.67
CBX4-204ENST00000495122 MMP14P50281 582 aa19.2■□□□□ 0.66
CBX4-204ENST00000495122 ALX1Q15699 326 aa19.2■□□□□ 0.66
CBX4-204ENST00000495122 NBPF9Q3BBW0 867 aa19.2■□□□□ 0.66
CBX4-204ENST00000495122 SLC9C2Q5TAH2 1124 aa19.2■□□□□ 0.66
CBX4-204ENST00000495122 LAMA4Q16363 1823 aa19.2■□□□□ 0.66
CBX4-204ENST00000495122 GPAA1O43292 621 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 PDE6AP16499 860 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 GNAT2P19087 354 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 GTF2IP78347 998 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 RASGRF1Q13972 1273 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 TOB2Q14106 344 aaPredicted RBP19.19■□□□□ 0.66
CBX4-204ENST00000495122 KLHL40Q2TBA0 621 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 CAVIN4Q5BKX8 364 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 OGFOD1Q8N543 542 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
CBX4-204ENST00000495122 PIH1D3Q9NQM4 214 aaKnown RBP19.19■□□□□ 0.66
CBX4-204ENST00000495122 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
CBX4-204ENST00000495122 TCRBV5S4A2TA0A5A2 114 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 WNT10BO00744 389 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 CA12O43570 354 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 CPA1P15085 419 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 EXOSC10Q01780 885 aaKnown RBP19.18■□□□□ 0.66
CBX4-204ENST00000495122 ME3Q16798 604 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
CBX4-204ENST00000495122 TSKSQ9UJT2 592 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 TPCN1Q9ULQ1 816 aa19.18■□□□□ 0.66
CBX4-204ENST00000495122 SCAF8Q9UPN6 1271 aaKnown RBP19.18■□□□□ 0.66
CBX4-204ENST00000495122 E7EWF7 191 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 IDH1O75874 414 aaKnown RBP19.17■□□□□ 0.66
CBX4-204ENST00000495122 SLC10A3P09131 477 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 IL1R1P14778 569 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 PI16Q6UXB8 463 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 ZNF804AQ7Z570 1209 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 KIAA0825Q8IV33 1275 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 CERS5Q8N5B7 392 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 ZBED3Q96IU2 234 aaPredicted RBP19.17■□□□□ 0.66
CBX4-204ENST00000495122 DENND2AQ9ULE3 1009 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
CBX4-204ENST00000495122 STX6O43752 255 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 ZSCAN22P10073 491 aaPredicted RBP19.16■□□□□ 0.66
CBX4-204ENST00000495122 ZNF157P51786 506 aaPredicted RBP19.16■□□□□ 0.66
CBX4-204ENST00000495122 FKBP1BP68106 108 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 PKP1Q13835 747 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
CBX4-204ENST00000495122 CCDC83Q8IWF9 413 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 PUS7LQ9H0K6 701 aaKnown RBP19.16■□□□□ 0.66
CBX4-204ENST00000495122 HDAC9Q9UKV0 1011 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms