RNA–Protein interactions for RNA: ENST00000495000.1

C1orf61-222, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-222	ENST00000495000	CNKSR2	Q8WXI2	1034 aa		13.21	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.21	□□□□□ -0.29
C1orf61-222	ENST00000495000	OTUD5	Q96G74	571 aa		13.21	□□□□□ -0.29
C1orf61-222	ENST00000495000	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
C1orf61-222	ENST00000495000	TBC1D8	O95759	1140 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	BAG3	O95817	575 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	MAP4K4	O95819	1239 aa	Predicted RBP	13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	INHBE	P58166	350 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	IFNL1	Q8IU54	200 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	TEX11	Q8IYF3	940 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	LRRCC1	Q9C099	1032 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	ANTXR1	Q9H6X2	564 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	SNCAIP	Q9Y6H5	919 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	FOCAD	Q5VW36	1801 aa		13.2	□□□□□ -0.3
C1orf61-222	ENST00000495000	DDTL	A6NHG4	134 aa	Predicted RBP	13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	SPDYE5	A6NIY4	337 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	SMARCA5	O60264	1052 aa	Predicted RBP	13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	IGSF3	O75054	1194 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	PLCG2	P16885	1265 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	CYP7A1	P22680	504 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	INPP5B	P32019	993 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	SH3BP5L	Q7L8J4	393 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	ADGRA1	Q86SQ6	560 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	MAGEB6	Q8N7X4	407 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	CRBN	Q96SW2	442 aa		13.19	□□□□□ -0.3
C1orf61-222	ENST00000495000	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	NPM3	O75607	178 aa	Known RBP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	CAPN15	O75808	1086 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	ALDH1A1	P00352	501 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	GTF2A2	P52657	109 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	MAP3K12	Q12852	859 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	TTF1	Q15361	905 aa	Predicted RBP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	OTUD7B	Q6GQQ9	843 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	ERO1B	Q86YB8	467 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	DNAJC2	Q99543	621 aa	Known RBP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	ZNF112	Q9UJU3	913 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	ATRNL1	Q5VV63	1379 aa		13.18	□□□□□ -0.3
C1orf61-222	ENST00000495000	CCL15-CCL14	A0A0B4J2E2	113 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	PPP4C	P60510	307 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	CCL15	Q16663	113 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	TGFBRAP1	Q8WUH2	860 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	MS4A4A	Q96JQ5	239 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	BOLA2	Q9H3K6	86 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	DCTPP1	Q9H773	170 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	PCDHB15	Q9Y5E8	787 aa		13.17	□□□□□ -0.3
C1orf61-222	ENST00000495000	COL2A1	P02458	1487 aa	Predicted RBP	13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	DOCK1	Q14185	1865 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	TESPA1	A2RU30	521 aa	Predicted RBP	13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	GOLIM4	O00461	696 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	IRF6	O14896	467 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	SLURP2	P0DP57	97 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	DYNLL1	P63167	89 aa	Known RBP	13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	PPAT	Q06203	517 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	PPIL2	Q13356	520 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	DGKZ	Q13574	1117 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	NOL9	Q5SY16	702 aa	Known RBP	13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	MAPKAPK5	Q8IW41	473 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	MIGA1	Q8NAN2	632 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	BRI3BP	Q8WY22	251 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	PTPN18	Q99952	460 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	ATAD5	Q96QE3	1844 aa		13.16	□□□□□ -0.3
C1orf61-222	ENST00000495000	MYH1	P12882	1939 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	MYH7	P12883	1935 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	FAM196B	A6NMK8	535 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	PHF20L1	A8MW92	1017 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	GPR25	O00155	361 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	ATP5J	P18859	108 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	MAP3K10	Q02779	954 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	SNAPC2	Q13487	334 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	SCYL3	Q8IZE3	742 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	EDC3	Q96F86	508 aa	Known RBP	13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	CFHR5	Q9BXR6	569 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	MCOLN1	Q9GZU1	580 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	R3HDML	Q9H3Y0	253 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	SIPA1L1	O43166	1804 aa		13.15	□□□□□ -0.3
C1orf61-222	ENST00000495000	FLT1	P17948	1338 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	TBC1D12	O60347	775 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	CETP	P11597	493 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	USP5	P45974	858 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	SLC9C2	Q5TAH2	1124 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	TMED8	Q6PL24	325 aa	Predicted RBP	13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	CERS3	Q8IU89	383 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	ABHD8	Q96I13	439 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	PICK1	Q9NRD5	415 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	PAG1	Q9NWQ8	432 aa		13.14	□□□□□ -0.31
C1orf61-222	ENST00000495000	MAGEB6P1	A0A0J9YX57	407 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	CTNND1	O60716	968 aa	Known RBP	13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	FKTN	O75072	461 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	PDE6A	P16499	860 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	CRHR2	Q13324	411 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	NOM1	Q5C9Z4	860 aa	Known RBP	13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	GPATCH3	Q96I76	525 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	HAUS7	Q99871	368 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	DHX36	Q9H2U1	1008 aa	Known RBP	13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	PI4KB	Q9UBF8	816 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms