RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 KRT40Q6A162 431 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 USP27XA6NNY8 438 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 ZBTB43O43298 467 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 PRDX5P30044 214 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
PHF3-205ENST00000494284 DPCR1Q3MIW9 517 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 ZNF512BQ96KM6 892 aaPredicted RBP14.41□□□□□ -0.1
PHF3-205ENST00000494284 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
PHF3-205ENST00000494284 MYH15Q9Y2K3 1946 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 BCL9LQ86UU0 1499 aa14.41□□□□□ -0.1
PHF3-205ENST00000494284 NPHP1O15259 732 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 GRIN1Q05586 938 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 NTRK3Q16288 839 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 PARP10Q53GL7 1025 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 LINC00301Q8NCQ3 95 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 MYRIPQ8NFW9 859 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 ZNF396Q96N95 335 aaPredicted RBP14.4□□□□□ -0.1
PHF3-205ENST00000494284 FAM205CA6NFA0 338 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 CYP2D6P10635 497 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 MFSD6Q6ZSS7 791 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 NBPF5PQ86XG9 351 aaPredicted RBP14.4□□□□□ -0.1
PHF3-205ENST00000494284 ENGASEQ8NFI3 743 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 AATFQ9NY61 560 aaKnown RBP eCLIP14.4□□□□□ -0.1
PHF3-205ENST00000494284 FAM160A1Q05DH4 1040 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 IQCB1Q15051 598 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 AKNAD1Q5T1N1 836 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 ZNF710Q8N1W2 664 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 KIF3AQ9Y496 699 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 SLC12A7Q9Y666 1083 aa14.4□□□□□ -0.1
PHF3-205ENST00000494284 LRP5O75197 1615 aa14.4□□□□□ -0.11
PHF3-205ENST00000494284 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 C4BP0C0L5 1744 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 CICQ96RK0 1608 aaPredicted RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 DYNC1I1O14576 645 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 NR5A1Q13285 461 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 GRIK5Q16478 980 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 PLA2G4DQ86XP0 818 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 CCNL1Q9UK58 526 aaPredicted RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 NOM1Q5C9Z4 860 aaKnown RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 TDRD7Q8NHU6 1098 aaKnown RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
PHF3-205ENST00000494284 MRPS27Q92552 414 aaKnown RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.39□□□□□ -0.11
PHF3-205ENST00000494284 V9GYY5 206 aaPredicted RBP14.39□□□□□ -0.11
PHF3-205ENST00000494284 ATRNO75882 1429 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 ZRSR1Q15695 479 aaKnown RBP14.38□□□□□ -0.11
PHF3-205ENST00000494284 TPD52L1Q16890 204 aaPredicted RBP14.38□□□□□ -0.11
PHF3-205ENST00000494284 FAM47AQ5JRC9 791 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
PHF3-205ENST00000494284 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 SPTLC2O15270 562 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 VEGFAP15692 232 aaPredicted RBP14.38□□□□□ -0.11
PHF3-205ENST00000494284 PPARAQ07869 468 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 NFIXQ14938 502 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 STX1AQ16623 288 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 GLIPR1L2Q4G1C9 344 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 DHX40Q8IX18 779 aaKnown RBP14.38□□□□□ -0.11
PHF3-205ENST00000494284 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 USP21Q9UK80 565 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 MYH2Q9UKX2 1941 aa14.38□□□□□ -0.11
PHF3-205ENST00000494284 SPDYE4A6NLX3 237 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 ADAMTS3O15072 1205 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 FOXN1O15353 648 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 SMC2O95347 1197 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 IARSP41252 1262 aaKnown RBP14.37□□□□□ -0.11
PHF3-205ENST00000494284 FMR1NBQ8N0W7 255 aaPredicted RBP14.37□□□□□ -0.11
PHF3-205ENST00000494284 SETDB2Q96T68 719 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 CDC5LQ99459 802 aaKnown RBP14.37□□□□□ -0.11
PHF3-205ENST00000494284 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 MYH13Q9UKX3 1938 aa14.37□□□□□ -0.11
PHF3-205ENST00000494284 LMOD1P29536 600 aaPredicted RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 VPS72Q15906 364 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 ANO1Q5XXA6 986 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 LRRC4BQ9NT99 713 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 RTEL1Q9NZ71 1219 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 TNNT1P13805 278 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 TERF1P54274 439 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 RASGRP2Q7LDG7 609 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 USP17L21D6R901 530 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 WNT7AO00755 349 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 ZPR1O75312 459 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 PFKFB1P16118 471 aa14.36□□□□□ -0.11
PHF3-205ENST00000494284 RPS8P62241 208 aaKnown RBP14.36□□□□□ -0.11
PHF3-205ENST00000494284 MECOMQ03112 1051 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms