RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 PICALMQ13492 652 aa12□□□□□ -0.49
UFD1-210ENST00000494054 TAF1CQ15572 869 aaPredicted RBP12□□□□□ -0.49
UFD1-210ENST00000494054 TTC39AQ5SRH9 613 aa12□□□□□ -0.49
UFD1-210ENST00000494054 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
UFD1-210ENST00000494054 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
UFD1-210ENST00000494054 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
UFD1-210ENST00000494054 EAF2Q96CJ1 260 aaPredicted RBP12□□□□□ -0.49
UFD1-210ENST00000494054 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
UFD1-210ENST00000494054 DBNLQ9UJU6 430 aaKnown RBP12□□□□□ -0.49
UFD1-210ENST00000494054 TRIM17Q9Y577 477 aa12□□□□□ -0.49
UFD1-210ENST00000494054 BTBD19C9JJ37 291 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 CYP2E1P05181 493 aaPredicted RBP11.99□□□□□ -0.49
UFD1-210ENST00000494054 LDHCP07864 332 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 CETPP11597 493 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 GSTO1P78417 241 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 SP3Q02447 781 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 SNAPC2Q13487 334 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 CCDC158Q5M9N0 1113 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 NOL9Q5SY16 702 aaKnown RBP11.99□□□□□ -0.49
UFD1-210ENST00000494054 ZSCAN29Q8IWY8 852 aaPredicted RBP11.99□□□□□ -0.49
UFD1-210ENST00000494054 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.99□□□□□ -0.49
UFD1-210ENST00000494054 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
UFD1-210ENST00000494054 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 LRP2BPQ9P2M1 347 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
UFD1-210ENST00000494054 ZAP70P43403 619 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 MOGSQ13724 837 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
UFD1-210ENST00000494054 KCNH4Q9UQ05 1017 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 COG6Q9Y2V7 657 aa11.98□□□□□ -0.49
UFD1-210ENST00000494054 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
UFD1-210ENST00000494054 ADGRA1Q86SQ6 560 aa11.97□□□□□ -0.49
UFD1-210ENST00000494054 SH3RF3Q8TEJ3 882 aaPredicted RBP11.97□□□□□ -0.49
UFD1-210ENST00000494054 PIH1D3Q9NQM4 214 aaKnown RBP11.97□□□□□ -0.49
UFD1-210ENST00000494054 DOCK2Q92608 1830 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 TLR2O60603 784 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 MS4A1P11836 297 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 SIRT2Q8IXJ6 389 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 SCYL3Q8IZE3 742 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 EFCC1Q9HA90 598 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 ZCCHC17Q9NP64 241 aaKnown RBP11.96□□□□□ -0.49
UFD1-210ENST00000494054 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.49
UFD1-210ENST00000494054 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.49
UFD1-210ENST00000494054 PDHXO00330 501 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 CXCL11O14625 94 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 CTNND1O60716 968 aaKnown RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 PTPRAP18433 802 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 PPP4CP60510 307 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 RRP1BQ14684 758 aaKnown RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 NAA16Q6N069 864 aaPredicted RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 GPAT2Q6NUI2 795 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 CCDC84Q86UT8 332 aaPredicted RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 AACSQ86V21 672 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 ARHGAP39Q9C0H5 1083 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 OSBPL5Q9H0X9 879 aaPredicted RBP11.95□□□□□ -0.5
UFD1-210ENST00000494054 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
UFD1-210ENST00000494054 AATFQ9NY61 560 aaKnown RBP eCLIP11.95□□□□□ -0.5
UFD1-210ENST00000494054 TBC1D12O60347 775 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 ERC1Q8IUD2 1116 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
UFD1-210ENST00000494054 RHPN1Q8TCX5 695 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 ANTXR1Q9H6X2 564 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
UFD1-210ENST00000494054 CPA4Q9UI42 421 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 DDX19BQ9UMR2 479 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
UFD1-210ENST00000494054 MYO5AQ9Y4I1 1855 aaKnown RBP11.93□□□□□ -0.5
UFD1-210ENST00000494054 ADGRA2Q96PE1 1338 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 APBB1O00213 710 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
UFD1-210ENST00000494054 BAG3O95817 575 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 CTGFP29279 349 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 DYNLL1P63167 89 aaKnown RBP11.93□□□□□ -0.5
UFD1-210ENST00000494054 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
UFD1-210ENST00000494054 COL2A1P02458 1487 aaPredicted RBP11.93□□□□□ -0.5
UFD1-210ENST00000494054 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
UFD1-210ENST00000494054 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
UFD1-210ENST00000494054 IDH1O75874 414 aaKnown RBP11.92□□□□□ -0.5
UFD1-210ENST00000494054 CYP2C8P10632 490 aa11.92□□□□□ -0.5
UFD1-210ENST00000494054 CYP7A1P22680 504 aa11.92□□□□□ -0.5
UFD1-210ENST00000494054 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
UFD1-210ENST00000494054 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
UFD1-210ENST00000494054 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
UFD1-210ENST00000494054 PTCH2Q9Y6C5 1203 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms