RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 AOPEPQ8N6M6 819 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 JAKMIP1Q96N16 626 aaKnown RBP8.12□□□□□ -1.11
EPHA3-203ENST00000494014 GBP3Q9H0R5 595 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 IL25Q9H293 177 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 MRFAP1Q9Y605 127 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 LRRC37AA6NMS7 1700 aa8.12□□□□□ -1.11
EPHA3-203ENST00000494014 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 KINO60870 393 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 STARD3NLO95772 234 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 SETQ01105 290 aaPredicted RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 SOGA3Q5TF21 947 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 CCDC30Q5VVM6 783 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 STYK1Q6J9G0 422 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 STAG1Q8WVM7 1258 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 A1CFQ9NQ94 594 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 BABAM1Q9NWV8 329 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 TFIP11Q9UBB9 837 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 ZKSCAN1P17029 563 aaPredicted RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 PSMA5P28066 241 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 FAM173BQ6P4H8 233 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 LRRC31Q6UY01 552 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 DDX11Q96FC9 970 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 LARP6Q9BRS8 491 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 RAB11FIP3O75154 756 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 ERLIN2O94905 339 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 MICALL1Q8N3F8 863 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 ALDH8A1Q9H2A2 487 aaPredicted RBP8.11□□□□□ -1.11
EPHA3-203ENST00000494014 PDE11AQ9HCR9 933 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 RAI14Q9P0K7 980 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 NUP98P52948 1817 aa8.11□□□□□ -1.11
EPHA3-203ENST00000494014 ZPR1O75312 459 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 MNAT1P51948 309 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 TUBB2AQ13885 445 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 ATL3Q6DD88 541 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 DNAJC10Q8IXB1 793 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 DNAJC5GQ8N7S2 189 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 TUBB2BQ9BVA1 445 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 BRIP1Q9BX63 1249 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 RAB21Q9UL25 225 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 CBFA2T2O43439 604 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 NFIXQ14938 502 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 NBPF20Q3BBV1 942 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 BEND6Q5SZJ8 279 aaPredicted RBP8.1□□□□□ -1.11
EPHA3-203ENST00000494014 ZNF790Q6PG37 636 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 FOXR1Q6PIV2 292 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 POTEDQ86YR6 584 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 ERCC4Q92889 916 aaPredicted RBP8.1□□□□□ -1.11
EPHA3-203ENST00000494014 IFNKQ9P0W0 207 aa8.1□□□□□ -1.11
EPHA3-203ENST00000494014 PPP1R12AO14974 1030 aaPredicted RBP8.09□□□□□ -1.11
EPHA3-203ENST00000494014 ARHGAP6O43182 974 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 C21orf2O43822 256 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 HMOX1P09601 288 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 RESTQ13127 1097 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 EP400NLQ6ZTU2 488 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
EPHA3-203ENST00000494014 NECAB1Q8N987 351 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 MSANTD4Q8NCY6 345 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 AKAP2Q9Y2D5 859 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
EPHA3-203ENST00000494014 PDE6BP35913 854 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 CEP112Q8N8E3 955 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 CNNM3Q8NE01 707 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 IL17REQ8NFR9 667 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 FMNL2Q96PY5 1086 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 TPCN1Q9ULQ1 816 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 CACNA1FO60840 1977 aa8.09□□□□□ -1.11
EPHA3-203ENST00000494014 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.12
EPHA3-203ENST00000494014 CHL1O00533 1208 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 CAMTA2O94983 1202 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 CPA1P15085 419 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 LMNB1P20700 586 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 MCM6Q14566 821 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 PI4K2BQ8TCG2 481 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 RCOR1Q9UKL0 485 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 L1RE1Q9UN81 338 aa8.09□□□□□ -1.12
EPHA3-203ENST00000494014 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 CCDC189A1A4V9 331 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 VWA3AA6NCI4 1184 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 MYO1BO43795 1136 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 GNG11P61952 73 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 USPL1Q5W0Q7 1092 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 SRGAP1Q7Z6B7 1085 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 CTCFLQ8NI51 663 aaPredicted RBP8.08□□□□□ -1.12
EPHA3-203ENST00000494014 EPC1Q9H2F5 836 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 ZBTB1Q9Y2K1 713 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 SLX4Q8IY92 1834 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 SERPINB2P05120 415 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 HNRNPH1P31943 449 aaKnown RBP8.08□□□□□ -1.12
EPHA3-203ENST00000494014 LRCH2Q5VUJ6 765 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 C9orf131Q5VYM1 1079 aa8.08□□□□□ -1.12
EPHA3-203ENST00000494014 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms